Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | D9C09_RS17400 | Genome accession | NZ_CP032852 |
| Coordinates | 3250131..3250541 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | P42983 |
| Organism | Bacillus subtilis subsp. subtilis strain GFR-12 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 3245131..3255541
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C09_RS17370 (D9C09_17370) | - | 3245219..3245359 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| D9C09_RS17375 (D9C09_17375) | yqeF | 3245665..3246396 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| D9C09_RS17380 (D9C09_17380) | cwlH | 3246648..3247400 (-) | 753 | WP_069837642.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| D9C09_RS17385 (D9C09_17385) | yqeD | 3247587..3248213 (+) | 627 | WP_014480319.1 | TVP38/TMEM64 family protein | - |
| D9C09_RS17390 (D9C09_17390) | gnd | 3248232..3249125 (-) | 894 | WP_069837643.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| D9C09_RS17395 (D9C09_17395) | yqeB | 3249376..3250098 (+) | 723 | WP_014480321.1 | hypothetical protein | - |
| D9C09_RS17400 (D9C09_17400) | nucA/comI | 3250131..3250541 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| D9C09_RS17405 (D9C09_17405) | sigK | 3250737..3251465 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| D9C09_RS17410 (D9C09_17410) | - | 3251465..3251563 (+) | 99 | WP_031600702.1 | hypothetical protein | - |
| D9C09_RS23025 | - | 3251560..3251772 (-) | 213 | Protein_3365 | recombinase family protein | - |
| D9C09_RS17420 (D9C09_17420) | fumC | 3251991..3253379 (-) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| D9C09_RS17425 (D9C09_17425) | - | 3253546..3254436 (+) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=278938 D9C09_RS17400 WP_009967785.1 3250131..3250541(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain GFR-12]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=278938 D9C09_RS17400 WP_009967785.1 3250131..3250541(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain GFR-12]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |