Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   C7A15_RS08630 Genome accession   NZ_CP027658
Coordinates   1815014..1815418 (+) Length   134 a.a.
NCBI ID   WP_005079001.1    Uniprot ID   A0A022J074
Organism   Acinetobacter pittii strain Ap-W20     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1810014..1820418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7A15_RS08615 (C7A15_08660) relA 1811000..1813306 (+) 2307 WP_002117181.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  C7A15_RS08620 (C7A15_08665) - 1813353..1814126 (-) 774 WP_086376475.1 SDR family oxidoreductase -
  C7A15_RS08625 (C7A15_08670) mazG 1814239..1815045 (+) 807 WP_005079002.1 nucleoside triphosphate pyrophosphohydrolase -
  C7A15_RS08630 (C7A15_08675) comEA 1815014..1815418 (+) 405 WP_005079001.1 ComEA family DNA-binding protein Machinery gene
  C7A15_RS08635 (C7A15_08680) pcnB 1815544..1817007 (+) 1464 WP_005079000.1 polynucleotide adenylyltransferase PcnB -
  C7A15_RS08640 (C7A15_08685) folK 1817004..1817486 (+) 483 WP_044430983.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  C7A15_RS08645 (C7A15_08690) panB 1817532..1818341 (+) 810 WP_002117298.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  C7A15_RS08650 (C7A15_08695) panC 1818345..1819193 (+) 849 WP_002117191.1 pantoate--beta-alanine ligase -
  C7A15_RS08655 (C7A15_08700) rapZ 1819217..1820068 (+) 852 WP_002117179.1 RNase adapter RapZ -
  C7A15_RS08660 (C7A15_08705) - 1820065..1820334 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence


Protein


Download         Length: 134 a.a.        Molecular weight: 15484.79 Da        Isoelectric Point: 10.5869

>NTDB_id=278735 C7A15_RS08630 WP_005079001.1 1815014..1815418(+) (comEA) [Acinetobacter pittii strain Ap-W20]
MQLSMNLWKNKHNIFIILFWSLISSTSVQAQSFDQNFKEWKAKQQRYDQKLSMQHSSHSNSPKSSVMTDLSGQIHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKMRLTL

Nucleotide


Download         Length: 405 bp        

>NTDB_id=278735 C7A15_RS08630 WP_005079001.1 1815014..1815418(+) (comEA) [Acinetobacter pittii strain Ap-W20]
ATGCAGCTCAGCATGAATCTTTGGAAGAATAAGCACAATATTTTCATTATTTTATTTTGGAGCCTGATCTCATCAACGTC
AGTTCAGGCTCAATCTTTTGATCAAAATTTTAAGGAGTGGAAGGCTAAACAGCAGAGGTATGATCAGAAGTTGAGCATGC
AGCACTCCTCTCATTCTAACAGTCCAAAAAGTTCAGTTATGACTGATTTGTCAGGGCAAATACACTTGAATCAAGCCAAT
ATTGATGAGCTCCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAGGCAATTGTGGAATACCGTCAAAAGAATGGTGG
CTTTAAAAATATTGATGAATTTAAAAACGTAAAGGGCATTGGTCCAGCCATTTTTGAAAAGAATAAAATGCGTTTGACTT
TATAA

Domains


Predicted by InterproScan.

(73-133)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A022J074

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

70.073

100

0.716

  comEA Acinetobacter baumannii D1279779

69.343

100

0.709

  comEA Acinetobacter baylyi ADP1

43.548

92.537

0.403


Multiple sequence alignment