Detailed information NTG0277783

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: AM467_RS17960
• Genome accession: NZ_CP027530
• Coordinates: 3723957..3724439 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046423.1
• Uniprot ID: A0A9E9MD39
• Organism: Acinetobacter baumannii strain AR_0088
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3718957..3729439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM467_RS17925 (AM467_17925)	-	3719067..3720098 (+)	1032	Protein_3461	lipase secretion chaperone	-
AM467_RS17930 (AM467_17930)	-	3720213..3721154 (+)	942	WP_085943974.1	lipase family alpha/beta hydrolase	-
AM467_RS17935 (AM467_17935)	rplS	3721207..3721575 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
AM467_RS17940 (AM467_17940)	trmD	3721783..3722523 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AM467_RS17945 (AM467_17945)	rimM	3722569..3723117 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
AM467_RS17950 (AM467_17950)	rpsP	3723137..3723388 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
AM467_RS17955 (AM467_17955)	pilE	3723535..3723960 (-)	426	WP_000788337.1	type IV pilin protein	Machinery gene
AM467_RS17960 (AM467_17960)	pilY2	3723957..3724439 (-)	483	WP_001046423.1	type IV pilin protein	Machinery gene
AM467_RS17965 (AM467_17965)	pilY1	3724452..3728306 (-)	3855	WP_000768954.1	PilC/PilY family type IV pilus protein	Machinery gene
AM467_RS17970 (AM467_17970)	pilX	3728318..3729136 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17575.84 Da
• Isoelectric Point: 8.4834

>NTDB_id=277783 AM467_RS17960 WP_001046423.1 3723957..3724439(-) (pilY2) [Acinetobacter baumannii strain AR_0088]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=277783 AM467_RS17960 WP_001046423.1 3723957..3724439(-) (pilY2) [Acinetobacter baumannii strain AR_0088]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-127)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	38.953	100	0.419