Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AM467_RS17955 | Genome accession | NZ_CP027530 |
| Coordinates | 3723535..3723960 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain AR_0088 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3718535..3728960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM467_RS17925 (AM467_17925) | - | 3719067..3720098 (+) | 1032 | Protein_3461 | lipase secretion chaperone | - |
| AM467_RS17930 (AM467_17930) | - | 3720213..3721154 (+) | 942 | WP_085943974.1 | lipase family alpha/beta hydrolase | - |
| AM467_RS17935 (AM467_17935) | rplS | 3721207..3721575 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AM467_RS17940 (AM467_17940) | trmD | 3721783..3722523 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AM467_RS17945 (AM467_17945) | rimM | 3722569..3723117 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AM467_RS17950 (AM467_17950) | rpsP | 3723137..3723388 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AM467_RS17955 (AM467_17955) | pilE | 3723535..3723960 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AM467_RS17960 (AM467_17960) | pilY2 | 3723957..3724439 (-) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AM467_RS17965 (AM467_17965) | pilY1 | 3724452..3728306 (-) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=277782 AM467_RS17955 WP_000788337.1 3723535..3723960(-) (pilE) [Acinetobacter baumannii strain AR_0088]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=277782 AM467_RS17955 WP_000788337.1 3723535..3723960(-) (pilE) [Acinetobacter baumannii strain AR_0088]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |