Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   MGAS27961_RS02200 Genome accession   NZ_CP032665
Coordinates   420314..421348 (+) Length   344 a.a.
NCBI ID   WP_011285080.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS27961     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 415314..426348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS27961_RS02170 (MGAS27961_02170) tsaE 416379..416840 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  MGAS27961_RS02175 (MGAS27961_02175) - 416815..417339 (+) 525 WP_011285082.1 GNAT family N-acetyltransferase -
  MGAS27961_RS02180 (MGAS27961_02180) - 417348..418631 (+) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  MGAS27961_RS02185 (MGAS27961_02185) - 418742..419098 (-) 357 WP_002988657.1 hypothetical protein -
  MGAS27961_RS02190 (MGAS27961_02190) - 419095..419514 (-) 420 WP_011285081.1 HIT family protein -
  MGAS27961_RS02195 (MGAS27961_02195) pptA 419586..420311 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  MGAS27961_RS02200 (MGAS27961_02200) pptB 420314..421348 (+) 1035 WP_011285080.1 ABC transporter permease Regulator
  MGAS27961_RS02205 (MGAS27961_02205) ccrZ 421412..422203 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  MGAS27961_RS02210 (MGAS27961_02210) trmB 422203..422838 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  MGAS27961_RS02220 (MGAS27961_02220) rimP 423097..423633 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  MGAS27961_RS02225 (MGAS27961_02225) nusA 423808..424965 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  MGAS27961_RS02230 (MGAS27961_02230) rnpM 424981..425277 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  MGAS27961_RS02235 (MGAS27961_02235) - 425270..425572 (+) 303 WP_011285079.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40272.48 Da        Isoelectric Point: 10.3422

>NTDB_id=277268 MGAS27961_RS02200 WP_011285080.1 420314..421348(+) (pptB) [Streptococcus pyogenes strain MGAS27961]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGYAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAILLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=277268 MGAS27961_RS02200 WP_011285080.1 420314..421348(+) (pptB) [Streptococcus pyogenes strain MGAS27961]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTATGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAACGACTTTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTATATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTATCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427