Detailed information NTG0277210

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: CFK76_RS07085
• Genome accession: NZ_CP032652
• Coordinates: 1354742..1355743 (-)
• Length: 333 a.a.
• NCBI ID: WP_016264677.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain LZ217
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1349742..1360743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFK76_RS07070 (CFK76_07070)	-	1350238..1350942 (+)	705	WP_035147031.1	DUF4811 domain-containing protein	-
CFK76_RS07075 (CFK76_07075)	-	1351148..1351855 (-)	708	WP_011374126.1	glucosamine-6-phosphate deaminase	-
CFK76_RS07080 (CFK76_07080)	-	1352139..1354694 (+)	2556	WP_035147028.1	transglycosylase domain-containing protein	-
CFK76_RS07085 (CFK76_07085)	ccpA	1354742..1355743 (-)	1002	WP_016264677.1	catabolite control protein A	Regulator
CFK76_RS07090 (CFK76_07090)	-	1355960..1357057 (+)	1098	WP_016264676.1	M24 family metallopeptidase	-
CFK76_RS07095 (CFK76_07095)	-	1357651..1358088 (-)	438	WP_016264675.1	YtxH domain-containing protein	-
CFK76_RS07100 (CFK76_07100)	-	1358094..1358528 (-)	435	WP_016264674.1	DUF948 domain-containing protein	-
CFK76_RS07105 (CFK76_07105)	-	1358686..1359573 (+)	888	WP_011374119.1	mechanosensitive ion channel family protein	-
CFK76_RS07110 (CFK76_07110)	-	1359598..1360494 (+)	897	WP_016264673.1	DUF368 domain-containing protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36333.50 Da
• Isoelectric Point: 4.7948

>NTDB_id=277210 CFK76_RS07085 WP_016264677.1 1354742..1355743(-) (ccpA) [Latilactobacillus sakei strain LZ217]
MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVSDIYFAS
LARGIDDVATMYKYNIILANSDENNQKEVQVLNTLLAKQVDGLIYMGHSISDAIRAEFARSKTPIVLAGSIDPDEQVGSV
NIDYVAAVKDATLKLIKNGNEKVAFICGNLDFPINSKYRLRGYKDALNEAGIPYDESLIFETEYSYSAGEALFGKVQATG
ATAAVVSDDELAVGVLNAAVDAGVNIPTDFEIVTSNNTKLTEMVRPKMTSISQPLYDMGAVGMRLLTKMMNKEEIDDKTI
LLPYSIVDRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=277210 CFK76_RS07085 WP_016264677.1 1354742..1355743(-) (ccpA) [Latilactobacillus sakei strain LZ217]
ATGGAAAAACAAACAATTACAATTTACGACGTTGCGCGTGAAGCTGACGTATCAATGGCGACTGTCTCACGGGTTGTTAA
CGGGAACCCCAACGTTAAGCCTGCCACTCGCAAGAAAGTGCTTGAAGTGATCGACCGTTTAGACTATCGTCCTAACGCTG
TTGCTCGTGGTTTGGCAAGTAAGAAAACAACAACTGTTGGGGTTATTATCCCAGACGTTAGTGATATCTACTTTGCTTCA
TTAGCACGCGGGATTGATGATGTTGCCACAATGTACAAGTACAACATCATTTTAGCGAACTCAGATGAAAACAACCAAAA
GGAAGTTCAAGTATTGAATACCTTATTGGCAAAACAAGTAGATGGTTTAATCTACATGGGTCACAGTATCTCAGATGCAA
TCCGTGCTGAATTCGCCCGTTCTAAGACACCAATCGTATTAGCTGGTTCAATCGATCCAGACGAACAAGTCGGTAGTGTT
AATATTGACTACGTTGCAGCCGTTAAGGACGCAACTTTGAAGTTAATCAAGAACGGTAACGAAAAAGTCGCCTTCATCTG
TGGCAACTTAGATTTTCCAATCAACAGCAAATATCGTTTACGTGGCTATAAAGATGCCTTGAACGAAGCTGGTATTCCTT
ATGACGAAAGCTTAATTTTCGAAACAGAATACAGTTACAGTGCTGGTGAAGCCTTATTCGGTAAGGTTCAAGCAACTGGC
GCAACTGCTGCTGTTGTCAGTGACGATGAATTAGCCGTAGGTGTTTTAAATGCTGCTGTTGATGCAGGGGTTAATATTCC
AACTGACTTTGAAATTGTGACAAGTAATAACACGAAGTTAACTGAAATGGTTCGTCCTAAGATGACATCAATCTCACAAC
CTTTATATGATATGGGTGCTGTTGGGATGCGTCTGTTAACGAAGATGATGAACAAAGAAGAAATCGATGATAAGACAATC
CTATTGCCATATAGTATTGTTGATCGTCAATCAACTAAATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-332)

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	62.31	98.799	0.616
ccpA	Streptococcus gordonii str. Challis substr. CH1	60.486	98.799	0.598
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	56.456	100	0.565