Detailed information NTG0277005

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: CFN54_RS02220
• Genome accession: NZ_CP032635
• Coordinates: 490980..491981 (+)
• Length: 333 a.a.
• NCBI ID: WP_016264677.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain ZFM225
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 485980..496981

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFN54_RS02195 (CFN54_02195)	-	486229..487125 (-)	897	WP_016264673.1	DUF368 domain-containing protein	-
CFN54_RS02200 (CFN54_02200)	-	487150..488037 (-)	888	WP_011374119.1	mechanosensitive ion channel family protein	-
CFN54_RS02205 (CFN54_02205)	-	488195..488629 (+)	435	WP_016264674.1	DUF948 domain-containing protein	-
CFN54_RS02210 (CFN54_02210)	-	488635..489072 (+)	438	WP_016264675.1	YtxH domain-containing protein	-
CFN54_RS02215 (CFN54_02215)	-	489666..490763 (-)	1098	WP_016264676.1	M24 family metallopeptidase	-
CFN54_RS02220 (CFN54_02220)	ccpA	490980..491981 (+)	1002	WP_016264677.1	catabolite control protein A	Regulator
CFN54_RS02225 (CFN54_02225)	-	492029..494584 (-)	2556	WP_035147028.1	transglycosylase domain-containing protein	-
CFN54_RS02230 (CFN54_02230)	-	494868..495575 (+)	708	WP_011374126.1	glucosamine-6-phosphate deaminase	-
CFN54_RS02235 (CFN54_02235)	-	495781..496485 (-)	705	WP_035147031.1	DUF4811 domain-containing protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36333.50 Da
• Isoelectric Point: 4.7948

>NTDB_id=277005 CFN54_RS02220 WP_016264677.1 490980..491981(+) (ccpA) [Latilactobacillus sakei strain ZFM225]
MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVSDIYFAS
LARGIDDVATMYKYNIILANSDENNQKEVQVLNTLLAKQVDGLIYMGHSISDAIRAEFARSKTPIVLAGSIDPDEQVGSV
NIDYVAAVKDATLKLIKNGNEKVAFICGNLDFPINSKYRLRGYKDALNEAGIPYDESLIFETEYSYSAGEALFGKVQATG
ATAAVVSDDELAVGVLNAAVDAGVNIPTDFEIVTSNNTKLTEMVRPKMTSISQPLYDMGAVGMRLLTKMMNKEEIDDKTI
LLPYSIVDRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=277005 CFN54_RS02220 WP_016264677.1 490980..491981(+) (ccpA) [Latilactobacillus sakei strain ZFM225]
ATGGAAAAACAAACAATTACAATTTACGACGTTGCGCGTGAAGCTGACGTATCAATGGCGACTGTCTCACGGGTTGTTAA
CGGGAACCCCAACGTTAAGCCTGCCACTCGCAAGAAAGTGCTTGAAGTGATCGACCGTTTAGACTATCGTCCTAACGCTG
TTGCTCGTGGTTTGGCAAGTAAGAAAACAACAACTGTTGGGGTTATTATCCCAGACGTTAGTGATATCTACTTTGCTTCA
TTAGCACGCGGGATTGATGATGTTGCCACAATGTACAAGTACAACATCATTTTAGCGAACTCAGATGAAAACAACCAAAA
GGAAGTTCAAGTATTGAATACCTTATTGGCAAAACAAGTAGATGGTTTAATCTACATGGGTCACAGTATCTCAGATGCAA
TCCGTGCTGAATTCGCCCGTTCTAAGACACCAATCGTATTAGCTGGTTCAATCGATCCAGACGAACAAGTCGGTAGTGTT
AATATTGACTACGTTGCAGCCGTTAAGGACGCAACTTTGAAGTTAATCAAGAACGGTAACGAAAAAGTCGCCTTCATCTG
TGGCAACTTAGATTTTCCAATCAACAGCAAATATCGTTTACGTGGCTATAAAGATGCCTTGAACGAAGCTGGTATTCCTT
ATGACGAAAGCTTAATTTTCGAAACAGAATACAGTTACAGTGCTGGTGAAGCCTTATTCGGTAAGGTTCAAGCAACTGGC
GCAACTGCTGCTGTTGTCAGTGACGATGAATTAGCCGTAGGTGTTTTAAATGCTGCTGTTGATGCAGGGGTTAATATTCC
AACTGACTTTGAAATTGTGACAAGTAATAACACGAAGTTAACTGAAATGGTTCGTCCTAAGATGACATCAATCTCACAAC
CTTTATATGATATGGGTGCTGTTGGGATGCGTCTGTTAACGAAGATGATGAACAAAGAAGAAATCGATGATAAGACAATC
CTATTGCCATATAGTATTGTTGATCGTCAATCAACTAAATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-332)

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	62.31	98.799	0.616
ccpA	Streptococcus gordonii str. Challis substr. CH1	60.486	98.799	0.598
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	56.456	100	0.565