Detailed information NTG0276921

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CEP79_RS05165
• Genome accession: NZ_CP027404
• Coordinates: 1046800..1047600 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841132.1
• Uniprot ID: Q9ZMA6
• Organism: Helicobacter pylori strain FDAARGOS_300
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1041800..1052600

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEP79_RS05130 (CEP79_05130)	pseH	1042294..1042836 (+)	543	WP_000742726.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
CEP79_RS05135 (CEP79_05135)	-	1042769..1043707 (-)	939	WP_000833880.1	tetraacyldisaccharide 4'-kinase	-
CEP79_RS05140 (CEP79_05140)	-	1043704..1044486 (-)	783	WP_001168315.1	NAD+ synthase	-
CEP79_RS05150 (CEP79_05150)	ilvC	1044735..1045727 (+)	993	WP_001207810.1	ketol-acid reductoisomerase	-
CEP79_RS05155 (CEP79_05155)	minD	1045752..1046558 (+)	807	WP_001019064.1	septum site-determining protein MinD	-
CEP79_RS05160 (CEP79_05160)	minE	1046555..1046788 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
CEP79_RS05165 (CEP79_05165)	dprA	1046800..1047600 (+)	801	WP_000841132.1	DNA-processing protein DprA	Machinery gene
CEP79_RS05170 (CEP79_05170)	dprB	1047597..1048001 (+)	405	WP_000599187.1	Holliday junction resolvase RuvX	Machinery gene
CEP79_RS05175 (CEP79_05175)	-	1048227..1049015 (+)	789	WP_000013350.1	cysteine-rich Sel1 repeat protein	-
CEP79_RS05180 (CEP79_05180)	-	1049200..1049538 (+)	339	WP_000699883.1	hypothetical protein	-
CEP79_RS05185 (CEP79_05185)	-	1049522..1050082 (+)	561	WP_001035884.1	hypothetical protein	-
CEP79_RS05190 (CEP79_05190)	-	1050253..1051134 (-)	882	WP_001117208.1	RluA family pseudouridine synthase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29884.85 Da
• Isoelectric Point: 8.5799

>NTDB_id=276921 CEP79_RS05165 WP_000841132.1 1046800..1047600(+) (dprA) [Helicobacter pylori strain FDAARGOS_300]
MKSNFQYSTLENIPKAFDILKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=276921 CEP79_RS05165 WP_000841132.1 1046800..1047600(+) (dprA) [Helicobacter pylori strain FDAARGOS_300]
ATGAAAAGCAATTTCCAATACAGCACGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACCCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCCTGAATGAGAGCGACGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

3D structure

• AlphaFold DB: Q9ZMA6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414