Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | CEP79_RS05170 | Genome accession | NZ_CP027404 |
| Coordinates | 1047597..1048001 (+) | Length | 134 a.a. |
| NCBI ID | WP_000599187.1 | Uniprot ID | Q9ZMA5 |
| Organism | Helicobacter pylori strain FDAARGOS_300 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1042597..1053001
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP79_RS05135 (CEP79_05135) | - | 1042769..1043707 (-) | 939 | WP_000833880.1 | tetraacyldisaccharide 4'-kinase | - |
| CEP79_RS05140 (CEP79_05140) | - | 1043704..1044486 (-) | 783 | WP_001168315.1 | NAD+ synthase | - |
| CEP79_RS05150 (CEP79_05150) | ilvC | 1044735..1045727 (+) | 993 | WP_001207810.1 | ketol-acid reductoisomerase | - |
| CEP79_RS05155 (CEP79_05155) | minD | 1045752..1046558 (+) | 807 | WP_001019064.1 | septum site-determining protein MinD | - |
| CEP79_RS05160 (CEP79_05160) | minE | 1046555..1046788 (+) | 234 | WP_000051412.1 | cell division topological specificity factor MinE | - |
| CEP79_RS05165 (CEP79_05165) | dprA | 1046800..1047600 (+) | 801 | WP_000841132.1 | DNA-processing protein DprA | Machinery gene |
| CEP79_RS05170 (CEP79_05170) | dprB | 1047597..1048001 (+) | 405 | WP_000599187.1 | Holliday junction resolvase RuvX | Machinery gene |
| CEP79_RS05175 (CEP79_05175) | - | 1048227..1049015 (+) | 789 | WP_000013350.1 | cysteine-rich Sel1 repeat protein | - |
| CEP79_RS05180 (CEP79_05180) | - | 1049200..1049538 (+) | 339 | WP_000699883.1 | hypothetical protein | - |
| CEP79_RS05185 (CEP79_05185) | - | 1049522..1050082 (+) | 561 | WP_001035884.1 | hypothetical protein | - |
| CEP79_RS05190 (CEP79_05190) | - | 1050253..1051134 (-) | 882 | WP_001117208.1 | RluA family pseudouridine synthase | - |
| CEP79_RS05195 (CEP79_05195) | recJ | 1051134..1052684 (-) | 1551 | WP_000810766.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15121.57 Da Isoelectric Point: 9.1542
>NTDB_id=276922 CEP79_RS05170 WP_000599187.1 1047597..1048001(+) (dprB) [Helicobacter pylori strain FDAARGOS_300]
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLRKKDIQVLVVGKPNESYADTHARIEHFIKLVDFKGE
IVFINEDNSSVEAYENLEHLGKKNKRIATKDGRLDSLSACRILERYCQQVLKKG
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLRKKDIQVLVVGKPNESYADTHARIEHFIKLVDFKGE
IVFINEDNSSVEAYENLEHLGKKNKRIATKDGRLDSLSACRILERYCQQVLKKG
Nucleotide
Download Length: 405 bp
>NTDB_id=276922 CEP79_RS05170 WP_000599187.1 1047597..1048001(+) (dprB) [Helicobacter pylori strain FDAARGOS_300]
ATGATTTTAGCATGCGATGTGGGGTTAAAACGCATTGGAATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTGGAAGC
GATTTTACGCCACAACAGGAATCAAGCCTCTAGGGATTTGAGCGATTTATTGAGAAAAAAAGACATTCAAGTGCTGGTGG
TGGGCAAACCCAACGAAAGCTATGCAGATACCCACGCCCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATCAATGAAGATAATTCTAGCGTAGAAGCTTATGAAAATTTAGAGCATTTGGGTAAGAAAAATAAGCGGAT
CGCTACCAAAGATGGCCGGTTAGACTCTTTGAGCGCTTGTAGGATTTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAAGG
GCTAG
ATGATTTTAGCATGCGATGTGGGGTTAAAACGCATTGGAATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTGGAAGC
GATTTTACGCCACAACAGGAATCAAGCCTCTAGGGATTTGAGCGATTTATTGAGAAAAAAAGACATTCAAGTGCTGGTGG
TGGGCAAACCCAACGAAAGCTATGCAGATACCCACGCCCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATCAATGAAGATAATTCTAGCGTAGAAGCTTATGAAAATTTAGAGCATTTGGGTAAGAAAAATAAGCGGAT
CGCTACCAAAGATGGCCGGTTAGACTCTTTGAGCGCTTGTAGGATTTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAAGG
GCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
93.182 |
98.507 |
0.918 |