Detailed information NTG0276523

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: D6I99_RS03280
• Genome accession: NZ_CP032522
• Coordinates: 621770..623743 (-)
• Length: 657 a.a.
• NCBI ID: WP_136696190.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BC
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 616770..628743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D6I99_RS03265	kdpB	617186..619231 (+)	2046	WP_136696188.1	potassium-transporting ATPase subunit KdpB	-
D6I99_RS03270	kdpC	619233..619841 (+)	609	WP_136696189.1	potassium-transporting ATPase subunit KdpC	-
D6I99_RS03275	kdpD	619844..621775 (+)	1932	WP_087704470.1	sensor histidine kinase KdpD	-
D6I99_RS03280	uvrB	621770..623743 (-)	1974	WP_136696190.1	excinuclease ABC subunit UvrB	Machinery gene
D6I99_RS03285	-	623897..624127 (+)	231	WP_002852327.1	hypothetical protein	-
D6I99_RS03290	-	624117..624359 (+)	243	WP_002854947.1	hypothetical protein	-
D6I99_RS03295	Cj0683	624356..624793 (+)	438	WP_002852324.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
D6I99_RS03300	priA	624775..626628 (+)	1854	WP_087695597.1	primosomal protein N'	-
D6I99_RS03305	cipA	626638..628031 (-)	1394	Protein_638	DUF2972 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 75914.52 Da
• Isoelectric Point: 7.0580

>NTDB_id=276523 D6I99_RS03280 WP_136696190.1 621770..623743(-) (uvrB) [Campylobacter jejuni strain BC]
MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
GMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKGKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKNCQFLFVSATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVMQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSATSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQMAYNKKHNITPTSVKRHIEESLKNEEDLGEIYRKGKKLEKMPASERAKLVKELRKQMLEAAKALE
FEKAAAIRDEINKLRDL

Nucleotide

• Length: 1974 bp

>NTDB_id=276523 D6I99_RS03280 WP_136696190.1 621770..623743(-) (uvrB) [Campylobacter jejuni strain BC]
ATGTTAGAACTTACCAGCGAATTTAAACCTAGTCCTGATCAACAAGAAGCCATAAAAGGTATAGTAAAAAGTATAAAAAA
AGGCAACAAATATCAAACCTTACTAGGCGTTACAGGAAGTGGAAAAACCTTTACCATGGCAAATGTCATTAAAGAACTTA
ATATGCCCACTCTTATCATGAGTCACAACAAAAGCCTTTGTGCGCAACTTTATAGCGAATTTAAAGGCTTTTTTTCTAAA
AATCATGTGGAATATTTTATATCTTATTATGATTATTATCAACCTGAAGCCTATATTCCACGCACTGATGTTTTCATAGA
AAAAGACAGCTCCACTAATGAAGACTTAGAGCGTTTAAGACTGAGTGCTACTGCTTCTCTTTTAAGTTATGAAGATGTAG
TTTGCATAGCTAGTGTTTCAGCAAATTATGGACTTGGTAATCCAAATGAATACATAGGCATGGTTTTAATCTTTGAACTA
GGTATGCAAATTTCACAAAAAGAACTTTTAAAAAAACTTGTAGATATGGGTTATAAAAGAAATGATAATTTTTTTGATCG
TGCAGATTTTAGAGTTCAAGGAGATATTATAGACATTTATCCAGCTTATTATGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGCGATGAGCTTGATGCTATGTATCATTACAATGTTTTAGAAAATAAAAAAGGCAAAGATTTAAAACGCTTCATACTC
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATATCAACGCCTTAAACAAAGGGTTGAATTTGATCTTGAAATGC
TTACAAGCACAGGAATGTGTAAAGGCGTTGAAAATTATGCAAGGCATTTAACAGGGCTTAAAGAAGGTGATACTCCTTAT
ACGCTTTTTGATTATTTTGCGATTAAAAATAGGAAATTTCTTGTTATAGTCGATGAAAGCCATGTATCTTTACCACAATT
TAGAGGTATGTTTGCAGGAGATAGAAGCAGAAAACAAACTTTGGTAGATTATGGTTTTCGTTTACCTTCAGCCTTGGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAAATTGTCAATTTCTTTTTGTTTCAGCCACACCTGCACCTTTAGAA
CTTGAACTTAGCAAAGAAAACATCTTTCATCAAATCATGCGTCCTACAGGACTGCTTGATCCTTTAATAGAGTTAAAAGA
TAGTGATAATCAGGTTGAAATTTTATTTGATGAGGCTAAAAAAGTCATGCAAAGAAACGAGCGAGTTTTAGTAACTGTAC
TGACTAAAAAACTTGCCGAAGAGCTTACAAGGTATTATTTAGAGCTTGGTATAAAAGTCAAATACATGCACTCAGATATC
GATGCTATAGAACGCAATGAAATCATAAGAGGTTTAAGAAGCGGTGCTTTTGATATGCTAATTGGCATTAACTTACTTAG
AGAAGGACTAGACCTACCTGAAGTTTCACTCATTGCCATTATGGATGCAGATAAGGAAGGCTTTTTAAGAAGTGCTACAA
GTTTAATCCAAACCATGGGAAGAGCAGCTAGAAATGTCAATGGTAAGGTTTTGCTTTTTTGCAAAAAAATCACAAAATCC
ATGCAAGAAGCTATGGATACCACCAATGAACGCCGCAAACTTCAAATGGCTTATAATAAAAAACACAATATCACGCCAAC
TTCAGTTAAACGCCATATTGAAGAGAGTTTGAAAAATGAAGAGGATTTGGGCGAAATTTATCGCAAAGGTAAAAAACTAG
AAAAAATGCCTGCTAGCGAAAGAGCAAAACTTGTCAAAGAGTTAAGAAAACAAATGCTTGAAGCAGCTAAAGCACTTGAG
TTTGAAAAAGCTGCTGCAATTAGAGATGAGATTAATAAATTAAGGGATTTATAA

Domains

Predicted by InterProScan.

• UvrB/uvrC motif (UVR) (623-656)

• UvrB interaction domain (UvrB_inter) (158-246)

• Helicase conserved C-terminal domain (Helicase_C) (437-544)

• Ultra-violet resistance protein B (UvrB) (552-593)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	51.08	98.63	0.504
uvrB	Streptococcus pneumoniae D39	51.08	98.63	0.504
uvrB	Streptococcus pneumoniae TIGR4	51.08	98.63	0.504