Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C6N17_RS04085 Genome accession   NZ_CP027254
Coordinates   711957..712340 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain WCHAP100020     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 706957..717340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C6N17_RS04075 (C6N17_04075) nolF 709855..710964 (-) 1110 WP_078210303.1 efflux RND transporter periplasmic adaptor subunit -
  C6N17_RS04080 (C6N17_04080) - 711034..711672 (-) 639 WP_005072790.1 hypothetical protein -
  C6N17_RS04085 (C6N17_04085) pilG 711957..712340 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  C6N17_RS04090 (C6N17_04090) pilH 712363..712725 (+) 363 WP_002116220.1 response regulator -
  C6N17_RS04095 (C6N17_04095) pilI 712786..713322 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  C6N17_RS04100 (C6N17_04100) pilJ 713365..715443 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=276079 C6N17_RS04085 WP_000389061.1 711957..712340(+) (pilG) [Acinetobacter pittii strain WCHAP100020]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=276079 C6N17_RS04085 WP_000389061.1 711957..712340(+) (pilG) [Acinetobacter pittii strain WCHAP100020]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCGGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment