Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | C6N17_RS02280 | Genome accession | NZ_CP027254 |
| Coordinates | 360836..361363 (+) | Length | 175 a.a. |
| NCBI ID | WP_002116864.1 | Uniprot ID | A0AAN4MGG3 |
| Organism | Acinetobacter pittii strain WCHAP100020 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 355836..366363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N17_RS02265 (C6N17_02270) | pilM | 358377..359435 (+) | 1059 | WP_031945632.1 | pilus assembly protein PilM | Machinery gene |
| C6N17_RS02270 (C6N17_02275) | pilN | 359435..360076 (+) | 642 | WP_002116944.1 | PilN domain-containing protein | Machinery gene |
| C6N17_RS02275 (C6N17_02280) | pilO | 360073..360825 (+) | 753 | WP_002116684.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| C6N17_RS02280 (C6N17_02285) | pilP | 360836..361363 (+) | 528 | WP_002116864.1 | pilus assembly protein PilP | Machinery gene |
| C6N17_RS02285 (C6N17_02290) | pilQ | 361426..363591 (+) | 2166 | WP_002116833.1 | type IV pilus secretin PilQ | Machinery gene |
| C6N17_RS02290 (C6N17_02295) | aroK | 363603..364172 (+) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
| C6N17_RS02295 (C6N17_02300) | aroB | 364201..365283 (+) | 1083 | WP_002116776.1 | 3-dehydroquinate synthase | - |
| C6N17_RS02300 (C6N17_02305) | - | 365300..366169 (+) | 870 | WP_019767417.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19265.32 Da Isoelectric Point: 9.0270
>NTDB_id=276066 C6N17_RS02280 WP_002116864.1 360836..361363(+) (pilP) [Acinetobacter pittii strain WCHAP100020]
MKLKQFSLSILACLALAGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKLKQFSLSILACLALAGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=276066 C6N17_RS02280 WP_002116864.1 360836..361363(+) (pilP) [Acinetobacter pittii strain WCHAP100020]
ATGAAACTTAAACAATTTTCTCTTTCTATTTTGGCATGTTTAGCTTTAGCTGGATGCGACTCTAGAATCGATGCTGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCAGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTACAGGTAGGGAATTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATTTGGTGGAGATTGTTCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA
ATGAAACTTAAACAATTTTCTCTTTCTATTTTGGCATGTTTAGCTTTAGCTGGATGCGACTCTAGAATCGATGCTGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCAGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTACAGGTAGGGAATTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATTTGGTGGAGATTGTTCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
88.571 |
100 |
0.886 |
| comL | Acinetobacter baylyi ADP1 |
75.152 |
94.286 |
0.709 |