Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | C6N17_RS02270 | Genome accession | NZ_CP027254 |
| Coordinates | 359435..360076 (+) | Length | 213 a.a. |
| NCBI ID | WP_002116944.1 | Uniprot ID | A0A009RUZ9 |
| Organism | Acinetobacter pittii strain WCHAP100020 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 354435..365076
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N17_RS02250 (C6N17_02255) | - | 354441..354773 (+) | 333 | WP_002116981.1 | DUF7709 family protein | - |
| C6N17_RS02255 (C6N17_02260) | rrmA | 354776..355600 (+) | 825 | WP_002117059.1 | putative RNA methyltransferase | - |
| C6N17_RS02260 (C6N17_02265) | ponA | 355655..358216 (-) | 2562 | WP_002116655.1 | penicillin-binding protein PBP1a | - |
| C6N17_RS02265 (C6N17_02270) | pilM | 358377..359435 (+) | 1059 | WP_031945632.1 | pilus assembly protein PilM | Machinery gene |
| C6N17_RS02270 (C6N17_02275) | pilN | 359435..360076 (+) | 642 | WP_002116944.1 | PilN domain-containing protein | Machinery gene |
| C6N17_RS02275 (C6N17_02280) | pilO | 360073..360825 (+) | 753 | WP_002116684.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| C6N17_RS02280 (C6N17_02285) | pilP | 360836..361363 (+) | 528 | WP_002116864.1 | pilus assembly protein PilP | Machinery gene |
| C6N17_RS02285 (C6N17_02290) | pilQ | 361426..363591 (+) | 2166 | WP_002116833.1 | type IV pilus secretin PilQ | Machinery gene |
| C6N17_RS02290 (C6N17_02295) | aroK | 363603..364172 (+) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 23921.36 Da Isoelectric Point: 5.4186
>NTDB_id=276064 C6N17_RS02270 WP_002116944.1 359435..360076(+) (pilN) [Acinetobacter pittii strain WCHAP100020]
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFAGWFYLNQKLNDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMSSFLA
TEEKKDKAISSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEAAK
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFAGWFYLNQKLNDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMSSFLA
TEEKKDKAISSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=276064 C6N17_RS02270 WP_002116944.1 359435..360076(+) (pilN) [Acinetobacter pittii strain WCHAP100020]
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTAGGGAGCAGCGTAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTGCAGGGTGGTTTTATTTGAATCAAAAATTAAATGATCAAGAACAAGCAA
ATCAGCTCATCATCAGTACAAACCAGAATCTAGATCAACAACTTAAAACCTTAAATGGCTTGCAAGAACAGCGGGATGCA
ATTATTGAGCGTATGAAGCTCATTCAAGGTTTGCAAAGCCAGCGTCCGGTCGTTGTACGTTTGGTGGATGAATTAGTACG
TGTGACCCCGGCAGCCATGTATTTGACTAAATTCAGTCGAACCGGAGATAAATTTACGATTGAAGGTAAAGCGGAAAGTC
CAAATACGGTTGCAGAATTATTACGTAATCTCGAAGCATCGCCATGGTATCGCAACGCTTTTATGAGTTCTTTCTTGGCG
ACCGAAGAGAAAAAAGATAAGGCTATCAGTTCTTTGCTTCCTAGAGTTGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGTGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGGCGGCAAAAT
GA
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTAGGGAGCAGCGTAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTGCAGGGTGGTTTTATTTGAATCAAAAATTAAATGATCAAGAACAAGCAA
ATCAGCTCATCATCAGTACAAACCAGAATCTAGATCAACAACTTAAAACCTTAAATGGCTTGCAAGAACAGCGGGATGCA
ATTATTGAGCGTATGAAGCTCATTCAAGGTTTGCAAAGCCAGCGTCCGGTCGTTGTACGTTTGGTGGATGAATTAGTACG
TGTGACCCCGGCAGCCATGTATTTGACTAAATTCAGTCGAACCGGAGATAAATTTACGATTGAAGGTAAAGCGGAAAGTC
CAAATACGGTTGCAGAATTATTACGTAATCTCGAAGCATCGCCATGGTATCGCAACGCTTTTATGAGTTCTTTCTTGGCG
ACCGAAGAGAAAAAAGATAAGGCTATCAGTTCTTTGCTTCCTAGAGTTGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGTGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGGCGGCAAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
89.202 |
100 |
0.892 |
| comN | Acinetobacter baylyi ADP1 |
71.569 |
95.775 |
0.685 |