Detailed information NTG0275532

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: CSB70_RS16800
• Genome accession: NZ_CP027178
• Coordinates: 3406021..3406503 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AR_0070
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3401021..3411503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSB70_RS16765 (CSB70_3354)	-	3401129..3402163 (+)	1035	WP_001189451.1	lipase secretion chaperone	-
CSB70_RS16770 (CSB70_3355)	-	3402278..3403219 (+)	942	WP_085946156.1	lipase family alpha/beta hydrolase	-
CSB70_RS16775 (CSB70_3356)	rplS	3403271..3403639 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
CSB70_RS16780 (CSB70_3357)	trmD	3403847..3404587 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
CSB70_RS16785 (CSB70_3358)	rimM	3404633..3405181 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
CSB70_RS16790 (CSB70_3359)	rpsP	3405201..3405452 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
CSB70_RS16795 (CSB70_3360)	pilE	3405599..3406024 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
CSB70_RS16800 (CSB70_3361)	pilY2	3406021..3406503 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
CSB70_RS16805 (CSB70_3362)	pilY1	3406516..3410370 (-)	3855	WP_000768966.1	PilC/PilY family type IV pilus protein	Machinery gene
CSB70_RS16810 (CSB70_3363)	pilX	3410382..3411200 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=275532 CSB70_RS16800 WP_001046417.1 3406021..3406503(-) (pilY2) [Acinetobacter baumannii strain AR_0070]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=275532 CSB70_RS16800 WP_001046417.1 3406021..3406503(-) (pilY2) [Acinetobacter baumannii strain AR_0070]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444