Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | CSB70_RS16795 | Genome accession | NZ_CP027178 |
| Coordinates | 3405599..3406024 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain AR_0070 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3400599..3411024
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB70_RS16765 (CSB70_3354) | - | 3401129..3402163 (+) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
| CSB70_RS16770 (CSB70_3355) | - | 3402278..3403219 (+) | 942 | WP_085946156.1 | lipase family alpha/beta hydrolase | - |
| CSB70_RS16775 (CSB70_3356) | rplS | 3403271..3403639 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| CSB70_RS16780 (CSB70_3357) | trmD | 3403847..3404587 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| CSB70_RS16785 (CSB70_3358) | rimM | 3404633..3405181 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| CSB70_RS16790 (CSB70_3359) | rpsP | 3405201..3405452 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| CSB70_RS16795 (CSB70_3360) | pilE | 3405599..3406024 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| CSB70_RS16800 (CSB70_3361) | pilY2 | 3406021..3406503 (-) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| CSB70_RS16805 (CSB70_3362) | pilY1 | 3406516..3410370 (-) | 3855 | WP_000768966.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=275531 CSB70_RS16795 WP_000788342.1 3405599..3406024(-) (pilE) [Acinetobacter baumannii strain AR_0070]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=275531 CSB70_RS16795 WP_000788342.1 3405599..3406024(-) (pilE) [Acinetobacter baumannii strain AR_0070]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |