Detailed information NTG0027537

Bioinformatically predicted

Overview

• Name: sxy/tfoX
• Type: Regulator
• Locus tag: APJL_RS09060
• Genome accession: NC_010278
• Coordinates: 1957149..1957805 (-)
• Length: 218 a.a.
• NCBI ID: WP_012263386.1
• Uniprot ID: -
• Organism: Actinobacillus pleuropneumoniae serovar 3 str. JL03
• Function: positive regulator of competence gene (predicted from homology) Competence regulation

Genomic Context

Location: 1952149..1962805

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APJL_RS09040 (APJL_1789)	nanA	1952523..1953401 (+)	879	WP_012263384.1	N-acetylneuraminate lyase	-
APJL_RS09045 (APJL_1790)	nagB	1953451..1954254 (+)	804	WP_005602606.1	glucosamine-6-phosphate deaminase	-
APJL_RS09050 (APJL_1791)	nagA	1954306..1955451 (+)	1146	WP_005599269.1	N-acetylglucosamine-6-phosphate deacetylase	-
APJL_RS09055 (APJL_1792)	fumC	1955600..1956994 (-)	1395	WP_012263385.1	class II fumarate hydratase	-
APJL_RS09060 (APJL_1793)	sxy/tfoX	1957149..1957805 (-)	657	WP_012263386.1	TfoX/Sxy family protein	Regulator
APJL_RS09065 (APJL_1794)	rpsJ	1958213..1958524 (+)	312	WP_001181005.1	30S ribosomal protein S10	-
APJL_RS09070 (APJL_1795)	rplC	1958550..1959176 (+)	627	WP_005599280.1	50S ribosomal protein L3	-
APJL_RS09075 (APJL_1796)	rplD	1959192..1959794 (+)	603	WP_005599282.1	50S ribosomal protein L4	-
APJL_RS09080 (APJL_1797)	rplW	1959791..1960096 (+)	306	WP_005599290.1	50S ribosomal protein L23	-
APJL_RS09085 (APJL_1798)	rplB	1960117..1960938 (+)	822	WP_005599291.1	50S ribosomal protein L2	-
APJL_RS09090 (APJL_1799)	rpsS	1960966..1961241 (+)	276	WP_005539416.1	30S ribosomal protein S19	-
APJL_RS09095 (APJL_1800)	rplV	1961252..1961584 (+)	333	WP_005599292.1	50S ribosomal protein L22	-
APJL_RS09100 (APJL_1801)	rpsC	1961603..1962310 (+)	708	WP_005599293.1	30S ribosomal protein S3	-
APJL_RS09105 (APJL_1802)	rplP	1962324..1962734 (+)	411	WP_005599294.1	50S ribosomal protein L16	-

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 25657.13 Da
• Isoelectric Point: 9.9359

>NTDB_id=27537 APJL_RS09060 WP_012263386.1 1957149..1957805(-) (sxy/tfoX) [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
MAISPKKFQYLKEIFSPLGEINFKSYFSYLGIFKDDTMFALYDHKNDRLYLRKSAQFYPDIIRTIPIHFLIDRRIGKQQS
HIFYLIPSSIIHNLHLYTHWILSAIEEYQTAKAKLISQNKNKIRLLPNLNINIERLLARIEIYTVDDLKNVGVINAFVKL
IMLGLEVTELHLFKLYAALEHKYIYMLSKQEKQSLLIEADLSLYNAGLRKRFAISQAN

Nucleotide

• Length: 657 bp

>NTDB_id=27537 APJL_RS09060 WP_012263386.1 1957149..1957805(-) (sxy/tfoX) [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
ATGGCAATATCCCCAAAAAAGTTCCAATATCTTAAGGAGATTTTTAGTCCTCTTGGAGAAATTAACTTCAAAAGCTATTT
TTCTTACTTAGGAATATTTAAAGACGATACTATGTTCGCCCTCTATGATCATAAAAACGATCGATTATACTTAAGAAAAT
CCGCTCAATTTTATCCGGATATTATAAGAACAATACCGATACATTTTTTAATTGATCGTCGTATCGGTAAGCAACAATCT
CATATTTTTTATCTTATACCTTCTTCTATTATTCACAATCTTCATTTATATACTCATTGGATTCTCTCTGCTATCGAAGA
ATATCAAACTGCAAAGGCCAAATTGATTTCTCAAAATAAAAATAAAATTCGTCTGCTTCCCAATTTGAATATCAATATAG
AAAGATTATTGGCACGTATTGAGATTTATACCGTAGATGATTTAAAAAACGTAGGCGTGATTAATGCGTTTGTAAAACTG
ATAATGCTAGGCTTGGAAGTAACCGAATTACACCTCTTCAAACTCTACGCTGCGCTCGAACATAAATATATCTATATGTT
ATCCAAGCAAGAAAAACAATCCCTATTAATTGAAGCCGATTTATCTCTCTATAACGCAGGCCTACGTAAACGCTTCGCTA
TCTCACAGGCTAACTAA

Domains

Predicted by InterProScan.

• TfoX N-terminal domain (TfoX_N) (13-107)

• TfoX C-terminal domain (TfoX_C) (120-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sxy/tfoX	Actinobacillus pleuropneumoniae strain HS143	99.541	100	0.995
sxy/tfoX	Actinobacillus suis H91-0380	63.256	98.624	0.624
sxy/tfoX	Glaesserella parasuis strain SC1401	39.234	95.872	0.376