Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   C5695_RS15855 Genome accession   NZ_CP027116
Coordinates   3040370..3042682 (-) Length   770 a.a.
NCBI ID   WP_117731529.1    Uniprot ID   A0AAD0MM41
Organism   Bacillus pumilus strain 145     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3035370..3047682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5695_RS15815 (C5695_15885) - 3035769..3036200 (+) 432 WP_106043633.1 Na(+)/H(+) antiporter subunit B -
  C5695_RS15820 (C5695_15890) - 3036200..3036541 (+) 342 WP_117731522.1 Na(+)/H(+) antiporter subunit C -
  C5695_RS15825 (C5695_15895) - 3036534..3038012 (+) 1479 WP_148959753.1 Na+/H+ antiporter subunit D -
  C5695_RS15830 (C5695_15900) - 3038019..3038498 (+) 480 WP_117731524.1 Na+/H+ antiporter subunit E -
  C5695_RS15835 (C5695_15905) - 3038495..3038779 (+) 285 WP_233230872.1 Na(+)/H(+) antiporter subunit F1 -
  C5695_RS15840 (C5695_15910) mnhG 3038763..3039137 (+) 375 WP_117731526.1 monovalent cation/H(+) antiporter subunit G -
  C5695_RS15845 (C5695_15915) - 3039235..3039624 (-) 390 WP_117731527.1 hotdog fold thioesterase -
  C5695_RS15850 (C5695_15920) comA 3039648..3040289 (-) 642 WP_117731528.1 response regulator transcription factor Regulator
  C5695_RS15855 (C5695_15925) comP 3040370..3042682 (-) 2313 WP_117731529.1 ATP-binding protein Regulator
  C5695_RS15860 (C5695_15930) comX 3042736..3042906 (-) 171 WP_117731530.1 competence pheromone ComX -
  C5695_RS15865 (C5695_15935) - 3042903..3043817 (-) 915 WP_117731531.1 polyprenyl synthetase family protein -
  C5695_RS15870 (C5695_15940) degQ 3043969..3044109 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  C5695_RS15875 (C5695_15945) - 3044615..3044968 (+) 354 WP_117731532.1 inner spore coat protein -
  C5695_RS15880 (C5695_15950) - 3045000..3046226 (-) 1227 WP_117731533.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89523.18 Da        Isoelectric Point: 7.5083

>NTDB_id=275072 C5695_RS15855 WP_117731529.1 3040370..3042682(-) (comP) [Bacillus pumilus strain 145]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYLIPLILYSICLFCIFFIIRINKEAQRKSAFLLVLFLLTICIGY
LSAGTSGIGERFSHYVIVFCLSSVFIFYIHFIYQYFKEFDLHITTQKTIRFLYSLPIINLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLRYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLALITYTLMLAVFYFKEILDFRFRLKRFSEKY
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLIVNKAFVLEVKPDGQIKEVDESTEGSSLWKVYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFVICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEVAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQATQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=275072 C5695_RS15855 WP_117731529.1 3040370..3042682(-) (comP) [Bacillus pumilus strain 145]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTAGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATTTAATACCTCTCATCCTGTATTCAATTTGTTTATTTTGTATCTTCTTTA
TCATTCGAATTAACAAAGAGGCCCAGCGAAAATCAGCATTTCTTTTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACATCAGGTATTGGTGAGAGATTTAGCCATTATGTGATCGTATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCAAAAAACAATTCGCTTTTTATATA
GTCTTCCTATAATTAATCTAGTAATAGAGTTATTTGTTCCGATTGATTCGGCGATAGCGAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATTATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATAAATATCATAGCATTTTGTCCATTTATCTTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTGGTAGATCCCTTTTTCTTAACTTCTTTTGTCTTGCTCATTCCTTTTTCACTCGTGTATCAA
TTTATGACGAACAAGCTTTACAATATGGATTTTCTGATTAGTAGACTGAGGTACTATGGTTTTCTAGCGATCACACCGAC
TATTTTCGTTGTCGTCACATTTTACATTTTGCAGAAACCAGAAGACTTGAAGTACACTTTGAAGCTCGCCTTAATCACTT
ATACACTCATGCTTGCGGTCTTTTATTTCAAAGAAATTCTAGATTTCCGCTTCCGGCTGAAACGTTTTTCTGAGAAGTAT
AATTATCAGGATAGTGTGTTTAAATTTACACAGCTCATTCGTGAAGCATCATCTCTTCATCAAGTACTGTATCATTTGAA
ATATACGATATTAGAAGTTCTCATTGTCAATAAAGCCTTTGTCCTTGAGGTGAAACCTGATGGACAAATAAAAGAAGTCG
ATGAGTCAACAGAAGGTAGCAGCCTATGGAAAGTGTATGTGGATCAATTTCAAGATATTTTAGGTGAAGTCGGGAAAATC
ATTGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAGCGGGGCGGGCACTCGTTTGTGATTTGCTGTTTATCCAATTT
ACAGACACCGAAATTAACCCGAGATGAGATTTCTTGGCTGAAAACATTGGCTTTTTATACTAGTGTCAGTTTAGAGAATG
TCGTCAAGATCGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAATCCCGCATGGCTGAAAAAAGTG
ATGTTTGCGATGGAGGAAAAGCAGCGCTCCGATTTAGCGAGAGATCTTCATGATTCTGTGCTGCAGGATTTGATATCGCT
GAAAAGGCAGTCAGAGATGTTTTTAACGAATTTCCAAAATGATCAATGCCCCACATCTATTGAACAATCTCTTATCTCAT
GGAACGAGCAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCACAGCTATTGTATGATCTA
GGTTTAGTCAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGTTGCACCGTTTCATATCCGGCTGAATACGACACG
CTTTGATAAAGAGCTGGACATTGATATTGACTCTCAGCTGAATATTTACCGGATTGTTCAGGAGCTGTTATCCAATGCAT
TGAAGCATTCTCAAGCCACCCAAGTGCTGGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGAT
GGTGTCGGTTTTGATGCAAGTCATCTTGATCAGCACACCATGAGCATGGGCCTATCGGGAATTAGAGAACGGGTCAAGGC
GTTAAATGGGAAACTTCACATTCACACAGCCCCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.29

100

0.496


Multiple sequence alignment