Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | C5695_RS05935 | Genome accession | NZ_CP027116 |
| Coordinates | 1184463..1185425 (+) | Length | 320 a.a. |
| NCBI ID | WP_117729939.1 | Uniprot ID | A0AAD0HL87 |
| Organism | Bacillus pumilus strain 145 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1179463..1190425
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5695_RS05905 (C5695_05905) | argF | 1179788..1180738 (+) | 951 | WP_117729934.1 | ornithine carbamoyltransferase | - |
| C5695_RS05910 (C5695_05910) | - | 1180839..1181018 (+) | 180 | WP_008348517.1 | YjzC family protein | - |
| C5695_RS05915 (C5695_05915) | - | 1181189..1182454 (+) | 1266 | WP_117729935.1 | MFS transporter | - |
| C5695_RS05920 (C5695_05920) | - | 1182572..1182766 (-) | 195 | WP_117729936.1 | YjzD family protein | - |
| C5695_RS05925 (C5695_05925) | - | 1182978..1183718 (+) | 741 | WP_117729937.1 | hypothetical protein | - |
| C5695_RS05930 (C5695_05930) | - | 1183794..1184372 (+) | 579 | WP_117729938.1 | nad binding enzyme | - |
| C5695_RS05935 (C5695_05935) | med | 1184463..1185425 (+) | 963 | WP_117729939.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| C5695_RS05940 (C5695_05940) | comZ | 1185436..1185633 (+) | 198 | WP_117729940.1 | ComZ family protein | Regulator |
| C5695_RS05945 (C5695_05945) | - | 1185644..1185877 (-) | 234 | WP_117729941.1 | hypothetical protein | - |
| C5695_RS05950 (C5695_05950) | - | 1186047..1186985 (+) | 939 | WP_117729942.1 | beta-ketoacyl-ACP synthase III | - |
| C5695_RS05955 (C5695_05955) | fabF | 1187007..1188248 (+) | 1242 | WP_117729943.1 | beta-ketoacyl-ACP synthase II | - |
| C5695_RS05960 (C5695_05960) | - | 1188326..1189129 (+) | 804 | WP_117729944.1 | DUF2268 domain-containing protein | - |
| C5695_RS05965 (C5695_05965) | - | 1189290..1190270 (+) | 981 | WP_117729945.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 35748.61 Da Isoelectric Point: 5.4379
>NTDB_id=275040 C5695_RS05935 WP_117729939.1 1184463..1185425(+) (med) [Bacillus pumilus strain 145]
MKYQRLVMIFSFLLLLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLADFVENWDDADKAVTLYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIASYKKTGKLPNEK
MKYQRLVMIFSFLLLLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLADFVENWDDADKAVTLYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIASYKKTGKLPNEK
Nucleotide
Download Length: 963 bp
>NTDB_id=275040 C5695_RS05935 WP_117729939.1 1184463..1185425(+) (med) [Bacillus pumilus strain 145]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
TATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTCCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATCAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGACAATGTCACGAATGTGACGTTTAAAGGAG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCGCATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTGGCTGACTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGACGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACCGATCAATCC
AATCTCGGCAGTCATACCGTCTTAACAAGCACAGTACAGCATGTGGATAAAGCGTACAGTATTATTGCGAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAGGATGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGTAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGACATTGAAAGTGATATTGCTTCTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
TATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTCCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATCAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGACAATGTCACGAATGTGACGTTTAAAGGAG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCGCATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTGGCTGACTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGACGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACCGATCAATCC
AATCTCGGCAGTCATACCGTCTTAACAAGCACAGTACAGCATGTGGATAAAGCGTACAGTATTATTGCGAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAGGATGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGTAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGACATTGAAAGTGATATTGCTTCTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
64.537 |
97.813 |
0.631 |