Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C5695_RS05940 Genome accession   NZ_CP027116
Coordinates   1185436..1185633 (+) Length   65 a.a.
NCBI ID   WP_117729940.1    Uniprot ID   A0AAD0HLB9
Organism   Bacillus pumilus strain 145     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1180436..1190633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5695_RS05910 (C5695_05910) - 1180839..1181018 (+) 180 WP_008348517.1 YjzC family protein -
  C5695_RS05915 (C5695_05915) - 1181189..1182454 (+) 1266 WP_117729935.1 MFS transporter -
  C5695_RS05920 (C5695_05920) - 1182572..1182766 (-) 195 WP_117729936.1 YjzD family protein -
  C5695_RS05925 (C5695_05925) - 1182978..1183718 (+) 741 WP_117729937.1 hypothetical protein -
  C5695_RS05930 (C5695_05930) - 1183794..1184372 (+) 579 WP_117729938.1 nad binding enzyme -
  C5695_RS05935 (C5695_05935) med 1184463..1185425 (+) 963 WP_117729939.1 BMP family ABC transporter substrate-binding protein Regulator
  C5695_RS05940 (C5695_05940) comZ 1185436..1185633 (+) 198 WP_117729940.1 ComZ family protein Regulator
  C5695_RS05945 (C5695_05945) - 1185644..1185877 (-) 234 WP_117729941.1 hypothetical protein -
  C5695_RS05950 (C5695_05950) - 1186047..1186985 (+) 939 WP_117729942.1 beta-ketoacyl-ACP synthase III -
  C5695_RS05955 (C5695_05955) fabF 1187007..1188248 (+) 1242 WP_117729943.1 beta-ketoacyl-ACP synthase II -
  C5695_RS05960 (C5695_05960) - 1188326..1189129 (+) 804 WP_117729944.1 DUF2268 domain-containing protein -
  C5695_RS05965 (C5695_05965) - 1189290..1190270 (+) 981 WP_117729945.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.49 Da        Isoelectric Point: 4.2837

>NTDB_id=275041 C5695_RS05940 WP_117729940.1 1185436..1185633(+) (comZ) [Bacillus pumilus strain 145]
MQHEKSMEFLQIAMKYFPKAKEELDKVGIQLDPEALQPLLSLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=275041 C5695_RS05940 WP_117729940.1 1185436..1185633(+) (comZ) [Bacillus pumilus strain 145]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCCATGAAATATTTTCCGAAGGCAAAAGAAGAATTAGATAAAGT
AGGTATTCAGCTTGACCCAGAAGCTCTTCAACCGCTTCTATCATTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment