Detailed information NTG0274870

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: D2M30_RS14750
• Genome accession: NZ_CP032146
• Coordinates: 2913672..2914676 (-)
• Length: 334 a.a.
• NCBI ID: WP_013353210.1
• Uniprot ID: A0A9P1NIY9
• Organism: Bacillus amyloliquefaciens strain YP6
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2908672..2919676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D2M30_RS14725 (D2M30_14740)	-	2909634..2910266 (+)	633	WP_125123099.1	GNAT family N-acetyltransferase	-
D2M30_RS14730 (D2M30_14745)	-	2910291..2910935 (+)	645	WP_125123100.1	acetoin utilization AcuB family protein	-
D2M30_RS14735 (D2M30_14750)	-	2910932..2912098 (+)	1167	WP_014470828.1	acetoin utilization protein AcuC	-
D2M30_RS14740 (D2M30_14755)	motS	2912108..2912797 (-)	690	WP_041481663.1	flagellar motor protein MotS	-
D2M30_RS14745 (D2M30_14760)	motP	2912787..2913602 (-)	816	WP_125123101.1	flagellar motor protein MotP	-
D2M30_RS14750 (D2M30_14765)	ccpA	2913672..2914676 (-)	1005	WP_013353210.1	catabolite control protein A	Regulator
D2M30_RS14755 (D2M30_14770)	-	2914954..2916030 (-)	1077	WP_013353211.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
D2M30_RS14760 (D2M30_14775)	ytxJ	2916265..2916591 (-)	327	WP_125123102.1	bacillithiol system redox-active protein YtxJ	-
D2M30_RS14765 (D2M30_14780)	-	2916617..2917030 (-)	414	WP_013353213.1	YtxH domain-containing protein	-
D2M30_RS14770 (D2M30_14785)	-	2917063..2917485 (-)	423	WP_013353214.1	DUF948 domain-containing protein	-
D2M30_RS14775 (D2M30_14790)	murC	2917642..2918940 (-)	1299	WP_013353215.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36868.21 Da
• Isoelectric Point: 4.9206

>NTDB_id=274870 D2M30_RS14750 WP_013353210.1 2913672..2914676(-) (ccpA) [Bacillus amyloliquefaciens strain YP6]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYAELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMAEPINRSKKLQGYKRALEEAGIAFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGMSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=274870 D2M30_RS14750 WP_013353210.1 2913672..2914676(-) (ccpA) [Bacillus amyloliquefaciens strain YP6]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGCATGGCGACTGTTTCCCGCGTCGTAAACGGCAA
TCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGCCTCGGCTACCGCCCGAACGCGGTGGCAA
GAGGACTGGCAAGCAAAAAAACGACTACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTTTACGCGGAACTTGCG
CGGGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAATTCAGACCAAAATCTCGAGAAGGAACT
GCACCTGTTAAATACGATGCTCGGTAAACAAGTAGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCCGTGCCGATCGTATTGGCTGCGTCAGTTGAAGAACAGGGTGAGACGCCTTCTGTCGCCATT
GATTATGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATCGCATTTGTCTCCGGACC
GATGGCAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGGCATTGCGTTTAACG
AGCAGTTCGTAGCGGAAGGCGATTACACCTATGATTCCGGGATGGAGGCGCTTCAAAGCCTGATGGGCCTTGACCGGAAA
CCGACGGCGATCCTTTCTGCGACGGATGAAATGGCTCTCGGCATTATTCATGCGGCCCAGGATCAGGGTATGTCGATTCC
TGACGATCTTGACATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTCTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTT
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

3D structure

• AlphaFold DB: A0A9P1NIY9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.03	98.802	0.524
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.904	99.401	0.506