Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   C5I45_RS17640 Genome accession   NZ_CP027061
Coordinates   3511772..3511891 (-) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus sp. ZY-1-1     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 3506772..3516891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5I45_RS17610 (C5I45_17595) - 3507010..3507768 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  C5I45_RS17615 (C5I45_17600) - 3507762..3508709 (-) 948 WP_069448545.1 iron chelate uptake ABC transporter family permease subunit -
  C5I45_RS17620 (C5I45_17605) ceuB 3508699..3509652 (-) 954 WP_003156332.1 ABC transporter permease Machinery gene
  C5I45_RS17630 (C5I45_17615) - 3510067..3511431 (+) 1365 WP_014304341.1 aspartate kinase -
  C5I45_RS17635 (C5I45_17620) - 3511526..3511621 (+) 96 WP_012116800.1 YjcZ family sporulation protein -
  C5I45_RS17640 (C5I45_17625) phrC 3511772..3511891 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  C5I45_RS17645 (C5I45_17630) rapC 3511875..3513023 (-) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  C5I45_RS17650 (C5I45_17635) - 3513176..3514609 (-) 1434 WP_161620115.1 HAMP domain-containing sensor histidine kinase -
  C5I45_RS17655 (C5I45_17640) - 3514596..3515279 (-) 684 WP_103695313.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=274843 C5I45_RS17640 WP_003156334.1 3511772..3511891(-) (phrC) [Bacillus sp. ZY-1-1]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=274843 C5I45_RS17640 WP_003156334.1 3511772..3511891(-) (phrC) [Bacillus sp. ZY-1-1]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment