Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   C5I45_RS17620 Genome accession   NZ_CP027061
Coordinates   3508699..3509652 (-) Length   317 a.a.
NCBI ID   WP_003156332.1    Uniprot ID   -
Organism   Bacillus sp. ZY-1-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3503699..3514652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5I45_RS17600 (C5I45_17585) - 3504578..3506002 (+) 1425 WP_015388705.1 MDR family MFS transporter -
  C5I45_RS17605 (C5I45_17590) - 3506044..3506988 (-) 945 WP_003156329.1 siderophore ABC transporter substrate-binding protein -
  C5I45_RS17610 (C5I45_17595) - 3507010..3507768 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  C5I45_RS17615 (C5I45_17600) - 3507762..3508709 (-) 948 WP_069448545.1 iron chelate uptake ABC transporter family permease subunit -
  C5I45_RS17620 (C5I45_17605) ceuB 3508699..3509652 (-) 954 WP_003156332.1 ABC transporter permease Machinery gene
  C5I45_RS17630 (C5I45_17615) - 3510067..3511431 (+) 1365 WP_014304341.1 aspartate kinase -
  C5I45_RS17635 (C5I45_17620) - 3511526..3511621 (+) 96 WP_012116800.1 YjcZ family sporulation protein -
  C5I45_RS17640 (C5I45_17625) phrC 3511772..3511891 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  C5I45_RS17645 (C5I45_17630) rapC 3511875..3513023 (-) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  C5I45_RS17650 (C5I45_17635) - 3513176..3514609 (-) 1434 WP_161620115.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=274842 C5I45_RS17620 WP_003156332.1 3508699..3509652(-) (ceuB) [Bacillus sp. ZY-1-1]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=274842 C5I45_RS17620 WP_003156332.1 3508699..3509652(-) (ceuB) [Bacillus sp. ZY-1-1]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGCCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTCGTTAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
AGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGTAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533

Multiple sequence alignment