Detailed information NTG0027482

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: NMCC_RS09910
• Genome accession: NC_010120
• Coordinates: 1929868..1930452 (+)
• Length: 194 a.a.
• NCBI ID: WP_002218660.1
• Uniprot ID: A9M3B7
• Organism: Neisseria meningitidis 053442
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1924868..1935452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMCC_RS09880 (NMCC_1874)	-	1925771..1926559 (-)	789	WP_012222066.1	hypothetical protein	-
NMCC_RS09885 (NMCC_1875)	bioH	1926561..1927304 (-)	744	WP_017629024.1	pimeloyl-ACP methyl ester esterase BioH	-
NMCC_RS09890 (NMCC_1876)	-	1927303..1928028 (+)	726	WP_014573736.1	ComF family protein	-
NMCC_RS09895 (NMCC_1877)	trmL	1928093..1928557 (+)	465	WP_002215661.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
NMCC_RS13060	-	1928568..1928690 (+)	123	WP_009346050.1	hypothetical protein	-
NMCC_RS09900 (NMCC_1878)	-	1928687..1929406 (+)	720	WP_002221595.1	septal ring lytic transglycosylase RlpA family protein	-
NMCC_RS09905 (NMCC_1879)	-	1929460..1929786 (+)	327	WP_012222070.1	PepSY domain-containing protein	-
NMCC_RS09910 (NMCC_1880)	ruvA	1929868..1930452 (+)	585	WP_002218660.1	Holliday junction branch migration protein RuvA	Machinery gene
NMCC_RS14825 (NMCC_1881)	-	1930452..1930589 (+)	138	WP_002231623.1	hypothetical protein	-
NMCC_RS09920 (NMCC_1882)	-	1930615..1932471 (+)	1857	WP_002255646.1	ABC transporter ATP-binding protein	-
NMCC_RS09925 (NMCC_1883)	rsgA	1932476..1933399 (+)	924	WP_012222072.1	ribosome small subunit-dependent GTPase A	-
NMCC_RS15385	-	1933426..1933602 (+)	177	WP_079267043.1	exodeoxyribonuclease VII	-
NMCC_RS09930 (NMCC_1884)	-	1933663..1933887 (+)	225	WP_002236646.1	exodeoxyribonuclease VII small subunit	-
NMCC_RS09935 (NMCC_1885)	-	1933871..1934767 (+)	897	WP_012222073.1	polyprenyl synthetase family protein	-
NMCC_RS09940 (NMCC_1886)	-	1934876..1935175 (-)	300	WP_002226942.1	DUF2818 family protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20659.85 Da
• Isoelectric Point: 5.1063

>NTDB_id=27482 NMCC_RS09910 WP_002218660.1 1929868..1930452(+) (ruvA) [Neisseria meningitidis 053442]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELAQAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=27482 NMCC_RS09910 WP_002218660.1 1929868..1930452(+) (ruvA) [Neisseria meningitidis 053442]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGCTATGA
GGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAAACATTCCGCCAACTGATCAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAGCTGGCGCAGGCGGTTGCAGAAGAAGACGT
GAAACGCCTGTCTTCCGCGCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACGGGCTGTTTGCCGCCGCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAGCGAACGCGAAGCAAAAGCGGCGGTCAAAGGCGTTCCGGAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCTTTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (150-192)

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA N terminal domain (RuvA_N) (1-62)

3D structure

• AlphaFold DB: A9M3B7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	38	100	0.392
ruvA	Streptococcus pneumoniae D39	38	100	0.392
ruvA	Streptococcus pneumoniae TIGR4	37.5	100	0.387
ruvA	Bacillus subtilis subsp. subtilis str. 168	35.922	100	0.381