Detailed information NTG0274818

Bioinformatically predicted

Overview

• Name: stkP
• Type: Regulator
• Locus tag: D2M30_RS08025
• Genome accession: NZ_CP032146
• Coordinates: 1577002..1578945 (+)
• Length: 647 a.a.
• NCBI ID: WP_125122594.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain YP6
• Function: require for competence development; phosphorylate ComE (predicted from homology) Competence regulation

Genomic Context

Location: 1572002..1583945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D2M30_RS08000 (D2M30_08015)	def	1572376..1572858 (+)	483	WP_125122593.1	peptide deformylase	-
D2M30_RS08005 (D2M30_08020)	fmt	1572863..1573816 (+)	954	WP_013352216.1	methionyl-tRNA formyltransferase	-
D2M30_RS08010 (D2M30_08025)	rsmB	1573803..1575146 (+)	1344	WP_013352217.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
D2M30_RS08015 (D2M30_08030)	rlmN	1575150..1576241 (+)	1092	WP_014470411.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
D2M30_RS08020 (D2M30_08035)	-	1576247..1577008 (+)	762	WP_013352219.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
D2M30_RS08025 (D2M30_08040)	stkP	1577002..1578945 (+)	1944	WP_125122594.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator
D2M30_RS08030 (D2M30_08045)	rsgA	1578960..1579850 (+)	891	WP_125122595.1	ribosome small subunit-dependent GTPase A	-
D2M30_RS08035 (D2M30_08050)	rpe	1579852..1580505 (+)	654	WP_014470407.1	ribulose-phosphate 3-epimerase	-
D2M30_RS08040 (D2M30_08055)	-	1580573..1581217 (+)	645	WP_088613852.1	thiamine diphosphokinase	-
D2M30_RS08045 (D2M30_08060)	spoVM	1581304..1581384 (+)	81	WP_003154329.1	stage V sporulation protein SpoVM	-
D2M30_RS08050 (D2M30_08065)	rpmB	1581461..1581649 (-)	189	WP_003154328.1	50S ribosomal protein L28	-
D2M30_RS08055 (D2M30_08070)	-	1581909..1582271 (+)	363	WP_065521305.1	Asp23/Gls24 family envelope stress response protein	-

Sequence

Protein

• Length: 647 a.a.
• Molecular weight: 71569.23 Da
• Isoelectric Point: 5.0200

>NTDB_id=274818 D2M30_RS08025 WP_125122594.1 1577002..1578945(+) (stkP) [Bacillus amyloliquefaciens strain YP6]
MLTGKRISGRYHILRPIGGGGMANVFLAEDIILEREVAIKILRFDFVNDIDFIRRFRREAQSASSLDHPNIVSIYDIGEE
GDIYYIVMEYVEGMTLKEYITAHGPLHPKEALSVMEQIVSAIAHAHHNHIVHRDIKPHNILIDHLGHIKVTDFGIATALT
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGKMPFDGESAVSIALKHLQTETPSARKWNPSIPQS
VENIILKATAKDPFHRYESAEDMEADIRTAFDAGRLNEQKFSVQDDEEMTKAIPVITDGAIAAPQAETPAETDDKEQPSA
KKKKRKWPWVLLAVCFIFIMAAVLAVTVFPSLFMPKEVSVPDVRGMKYEKAEALLEKNGLQADPDMTDIEDEKIEEGLMV
KTDPKAGSAVKEGSSVKLYKSIGKPKTRLIDVKGRPIDDAKKTLKDKGFKHVNVKEENDDSAAGTVIDQNPSAGTDMVAS
DDEVSLTVSLGPADVTLRDLKTYSKEAASGYLEDNGLQLVEKEAHSDDVPQGQVMKQEPAAGTAVKPGSDVEVTFSLGPE
EKPAKTVKEKISIPYEPEHEGDELEVQIAIDDKDHSISDTYDSFKIKEPTEKTIELKIDQGQKGYYQVMVDHKVLSYKTI
EYPKDND

Nucleotide

• Length: 1944 bp

>NTDB_id=274818 D2M30_RS08025 WP_125122594.1 1577002..1578945(+) (stkP) [Bacillus amyloliquefaciens strain YP6]
GTGTTAACCGGCAAGCGGATCAGCGGGCGTTATCATATCCTCCGGCCCATTGGCGGCGGCGGAATGGCGAACGTTTTTTT
AGCTGAGGACATCATTCTCGAACGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTTTGTGAATGACATTGATTTTATCA
GGCGTTTCAGAAGAGAAGCACAGTCGGCATCAAGCCTTGATCATCCGAATATCGTCAGTATTTACGATATCGGGGAGGAA
GGCGACATTTATTATATTGTCATGGAATATGTGGAAGGCATGACGTTAAAGGAATACATAACCGCACACGGACCGCTTCA
TCCGAAAGAAGCGCTGTCTGTTATGGAGCAGATCGTCTCAGCCATCGCCCATGCCCATCATAACCATATCGTGCATCGGG
ATATCAAACCGCACAATATTTTGATAGATCATTTAGGACATATCAAGGTGACGGATTTCGGCATCGCCACAGCCCTCACT
TCGACGACAATTACACATACGAATTCTGTGCTCGGCTCGGTTCATTATTTGTCTCCGGAGCAGGCGAGAGGCGGTCTGGC
AACGAAAAAATCGGATATTTACGCGCTCGGCATCGTGCTGTTTGAGCTCTTAACAGGCAAAATGCCTTTTGACGGAGAAT
CAGCCGTCAGCATTGCGTTAAAGCACCTGCAAACAGAAACGCCTTCCGCCAGAAAGTGGAACCCTTCCATTCCGCAGAGC
GTGGAAAACATTATTTTAAAGGCAACCGCCAAAGATCCGTTTCACCGCTATGAAAGCGCAGAGGACATGGAAGCGGACAT
CAGAACGGCTTTTGACGCCGGCAGGCTGAATGAACAAAAATTCTCCGTGCAGGATGATGAGGAAATGACGAAAGCGATTC
CTGTTATTACTGACGGTGCGATAGCCGCGCCTCAGGCGGAAACGCCGGCAGAGACGGATGATAAAGAACAGCCGTCCGCC
AAAAAGAAGAAACGGAAATGGCCGTGGGTTTTGCTGGCTGTCTGCTTTATTTTCATAATGGCGGCTGTTCTTGCAGTTAC
CGTGTTCCCGTCTTTGTTTATGCCAAAAGAGGTAAGCGTCCCCGATGTACGGGGCATGAAGTACGAAAAAGCGGAAGCCC
TGCTTGAAAAGAACGGCCTTCAAGCGGATCCTGATATGACGGACATTGAAGATGAAAAAATCGAAGAGGGATTAATGGTC
AAAACTGATCCGAAAGCGGGTTCTGCCGTTAAAGAAGGCTCTTCTGTAAAGCTGTACAAAAGCATCGGGAAACCGAAAAC
CCGGCTGATTGACGTGAAAGGCCGGCCGATCGATGATGCGAAAAAAACGCTTAAGGATAAAGGCTTCAAACATGTCAATG
TAAAAGAAGAGAACGATGACAGTGCGGCTGGCACCGTAATTGATCAGAACCCATCAGCCGGAACCGACATGGTCGCAAGC
GATGATGAAGTCAGCTTAACAGTCAGCCTCGGACCGGCGGACGTTACGCTGAGAGACTTAAAAACATACAGCAAAGAAGC
GGCTTCCGGGTATCTTGAAGATAACGGCCTGCAGCTTGTTGAAAAGGAAGCTCACTCAGATGACGTGCCTCAGGGACAGG
TCATGAAGCAAGAGCCTGCAGCCGGCACTGCGGTTAAGCCGGGAAGTGATGTTGAAGTGACGTTTTCGCTCGGGCCTGAA
GAAAAACCGGCCAAAACGGTAAAAGAAAAAATCAGCATCCCCTACGAACCCGAACATGAAGGGGACGAGCTCGAAGTGCA
AATCGCCATCGATGATAAAGACCACAGCATCTCTGATACGTATGACTCGTTTAAAATAAAAGAGCCGACTGAAAAAACAA
TTGAACTGAAGATTGATCAGGGACAGAAGGGGTATTATCAAGTGATGGTCGATCATAAAGTACTCAGCTACAAAACGATT
GAATACCCGAAAGATAATGACTGA

Domains

Predicted by InterProScan.

• PASTA domain (PASTA) (431-489)

• PASTA domain (PASTA) (495-556)

• PASTA domain (PASTA) (358-419)

• Protein kinase domain (Pkinase) (11-260)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
stkP	Streptococcus pneumoniae TIGR4	38.474	95.209	0.366
stkP	Streptococcus pneumoniae D39	38.149	95.209	0.363
stkP	Streptococcus pneumoniae R6	38.149	95.209	0.363
stkP	Streptococcus pneumoniae Rx1	37.987	95.209	0.362