Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   FORC77_RS08590 Genome accession   NZ_CP027030
Coordinates   1671301..1672794 (+) Length   497 a.a.
NCBI ID   WP_130349699.1    Uniprot ID   -
Organism   Vibrio vulnificus strain FORC_077     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1666301..1677794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC77_RS08575 (FORC77_1517) - 1667325..1668017 (+) 693 WP_043877164.1 tyrosine-protein kinase family protein -
  FORC77_RS08580 (FORC77_1518) - 1668014..1668832 (+) 819 WP_011150242.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
  FORC77_RS08585 (FORC77_1519) - 1668856..1671144 (+) 2289 WP_131069886.1 ATP-binding protein -
  FORC77_RS08590 (FORC77_1520) luxO 1671301..1672794 (+) 1494 WP_130349699.1 sigma-54 dependent transcriptional regulator Regulator
  FORC77_RS08595 (FORC77_1521) - 1672787..1673920 (+) 1134 WP_045598489.1 glycosyltransferase -
  FORC77_RS08600 (FORC77_1522) - 1674028..1675221 (+) 1194 WP_131069887.1 glycosyltransferase -
  FORC77_RS08605 (FORC77_1523) - 1675218..1676396 (+) 1179 WP_131069888.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 55736.76 Da        Isoelectric Point: 6.5960

>NTDB_id=274597 FORC77_RS08590 WP_130349699.1 1671301..1672794(+) (luxO) [Vibrio vulnificus strain FORC_077]
MRAKVLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERNTPQLVILDLKLPDMSGEDVLDWINQNDVPTAVIIA
TAHGSVDIAVSLMNKGAEDFLEKPIKADRLKTSIAVHLKRAKLEHLVENMQSRFDRPRYHGFIGACLPMQAVYKTIDSVA
PTTASVFINGESGTGKEVCAEAIHKQSLRKEQPFIAINCGAIPRDLMESEIFGHLKGAFTGATTDRKGAAMLANGGTLFL
DELCEMELEMQKKLLRFLQTGTFTPLGGSKEVKVDVRIICATNRDPLKEVEEGRFREDLYYRVHVVPIEMPPLRERGNDI
VELANHFLKTYAKEDGKKFNSISKEAQSILKKYNWPGNVRQLQNIIRNIVVLNDDNQLNVEHLPAQLTTKPQTVKEPAKL
STPPQPAQAVIHEMHNGHEALNHHSLETQTSKANPLTHNAFHHSDGSIRPMWQIEREAIQNAIAFCDGNVISAAVMLELS
PSTVYRKKQAWEAEENA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=274597 FORC77_RS08590 WP_130349699.1 1671301..1672794(+) (luxO) [Vibrio vulnificus strain FORC_077]
ATGCGAGCAAAAGTACTGTTAGTCGAGGATTCCACTTCACTTGCCATTTTATATAAGCAATACGTCAAAGATGAGCCCTA
TGACATTTTTCACGTAGAAACCGGACGTGACGCGATTCAGTTTATTGAGCGCAATACGCCGCAACTGGTGATTTTAGATC
TCAAGTTGCCCGATATGTCCGGGGAAGATGTGCTTGACTGGATCAACCAAAACGATGTTCCGACCGCGGTTATCATTGCC
ACCGCTCATGGTTCCGTCGACATCGCCGTCAGCTTAATGAACAAAGGGGCGGAAGATTTTCTCGAAAAGCCAATCAAAGC
CGACCGTTTAAAAACATCCATTGCCGTTCATCTAAAACGCGCCAAGTTAGAGCATTTGGTTGAGAACATGCAATCTCGCT
TCGACAGGCCACGTTATCATGGCTTTATCGGCGCGTGCCTGCCAATGCAAGCCGTTTATAAAACCATTGATTCCGTGGCA
CCAACCACCGCCAGTGTTTTTATCAACGGAGAGAGTGGCACAGGGAAAGAAGTGTGTGCTGAAGCGATCCACAAACAGAG
CCTACGCAAAGAGCAGCCCTTTATCGCAATCAACTGTGGGGCGATTCCTCGTGACTTAATGGAAAGCGAAATCTTTGGTC
ACTTAAAAGGGGCGTTTACCGGAGCGACAACCGACCGCAAAGGTGCGGCAATGCTGGCCAACGGCGGCACGTTGTTTCTC
GATGAATTGTGCGAAATGGAACTGGAGATGCAGAAAAAACTGCTGCGTTTTCTTCAGACTGGTACCTTCACCCCACTCGG
CGGCAGTAAAGAAGTCAAGGTGGATGTGCGCATCATCTGCGCCACCAATCGCGATCCCCTCAAAGAGGTCGAAGAAGGCC
GTTTTAGGGAAGATCTCTACTATCGTGTCCATGTGGTTCCCATTGAAATGCCGCCACTTAGAGAACGAGGTAATGACATT
GTTGAGCTGGCCAATCACTTCCTCAAAACTTACGCCAAAGAAGACGGCAAAAAATTCAACTCAATCAGCAAAGAAGCTCA
ATCAATACTCAAAAAATACAACTGGCCGGGCAATGTTCGTCAGTTGCAAAACATCATTCGCAACATTGTCGTTCTCAACG
ATGACAACCAACTGAATGTGGAACATTTGCCGGCTCAGCTCACCACCAAACCGCAAACCGTCAAAGAACCCGCTAAACTC
TCAACCCCACCTCAACCTGCTCAAGCGGTCATACACGAGATGCACAACGGACATGAGGCGTTAAACCATCATTCGCTTGA
GACGCAAACATCCAAGGCCAATCCACTCACCCACAATGCGTTCCACCATTCTGACGGCAGTATCCGTCCAATGTGGCAAA
TCGAACGCGAAGCGATTCAAAACGCCATCGCCTTTTGCGATGGCAACGTGATCAGTGCAGCGGTGATGTTGGAACTAAGC
CCCTCGACGGTGTATCGCAAAAAACAAGCGTGGGAGGCAGAAGAAAATGCCTGA

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(451-487)

Sigma-54 interaction domain (Sigma54_activat)

(144-309)

Response regulator receiver domain (Response_reg)

(5-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

50.823

97.787

0.497
  pilR Acinetobacter baumannii strain A118

37.014

98.39

0.364

Multiple sequence alignment