Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RL01_RS02905 | Genome accession | NZ_CP026957 |
| Coordinates | 510321..510665 (+) | Length | 114 a.a. |
| NCBI ID | WP_000844411.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_43 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 505321..515665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RL01_RS02865 (RL01_02865) | - | 505382..505585 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RL01_RS02870 (RL01_02870) | - | 505582..506568 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RL01_RS02875 (RL01_02875) | - | 506568..506897 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RL01_RS02880 (RL01_02880) | - | 506894..507517 (+) | 624 | WP_001223010.1 | MBL fold metallo-hydrolase | - |
| RL01_RS02885 (RL01_02885) | comGA | 507569..508543 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RL01_RS02890 (RL01_02890) | comGB | 508515..509585 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RL01_RS02895 (RL01_02895) | comGC | 509599..509910 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RL01_RS02900 (RL01_02900) | comGD | 509888..510334 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RL01_RS02905 (RL01_02905) | comGE | 510321..510665 (+) | 345 | WP_000844411.1 | hypothetical protein | Machinery gene |
| RL01_RS02910 (RL01_02910) | comGF | 510583..511080 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RL01_RS02915 (RL01_02915) | - | 511177..511323 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| RL01_RS02920 (RL01_02920) | - | 511313..511837 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| RL01_RS02925 (RL01_02925) | gcvT | 511996..513087 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RL01_RS02930 (RL01_02930) | gcvPA | 513107..514453 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12677.09 Da Isoelectric Point: 10.0406
>NTDB_id=273797 RL01_RS02905 WP_000844411.1 510321..510665(+) (comGE) [Staphylococcus aureus strain FDAARGOS_43]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINIDASKVILTTVSKINKEELK
KGVTIGKYDIKQSDQQICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINIDASKVILTTVSKINKEELK
KGVTIGKYDIKQSDQQICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 345 bp
>NTDB_id=273797 RL01_RS02905 WP_000844411.1 510321..510665(+) (comGE) [Staphylococcus aureus strain FDAARGOS_43]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATATTGATGCTTCTAAAGTAATTTTGACGACTGTATCTAAAATTAATAAAGAAGAACTTAAG
AAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTA
TCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATATTGATGCTTCTAAAGTAATTTTGACGACTGTATCTAAAATTAATAAAGAAGAACTTAAG
AAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTA
TCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
85.965 |
100 |
0.86 |