Detailed information NTG0272295

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: AM457_RS10335
• Genome accession: NZ_CP026761
• Coordinates: 2190601..2191308 (-)
• Length: 235 a.a.
• NCBI ID: WP_000203217.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AR_0078
• Function: regulate competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	2191684..2194086	2190601..2191308	flank	376

Gene organization within MGE regions

Location: 2190601..2194086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM457_RS10335 (AM457_10335)	crp	2190601..2191308 (-)	708	WP_000203217.1	cAMP-activated global transcriptional regulator CRP	Regulator
AM457_RS10340 (AM457_10340)	-	2191684..2192774 (+)	1091	WP_085940413.1	IS4-like element ISAba1 family transposase	-
AM457_RS18755	-	2192793..2192858 (+)	66	Protein_1973	hypothetical protein	-
AM457_RS10345 (AM457_10345)	-	2192996..2194086 (+)	1091	WP_085940413.1	IS4-like element ISAba1 family transposase	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26567.18 Da
• Isoelectric Point: 4.6625

>NTDB_id=272295 AM457_RS10335 WP_000203217.1 2190601..2191308(-) (crp) [Acinetobacter baumannii strain AR_0078]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDTSLEETPVTDEDYDDEE

Nucleotide

• Length: 708 bp

>NTDB_id=272295 AM457_RS10335 WP_000203217.1 2190601..2191308(-) (crp) [Acinetobacter baumannii strain AR_0078]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCAGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGTCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTGATACTTCATTAGAAGAAACCCCAGTCACTGACGAAGACTACGATGACGAAGAATAA

Domains

Predicted by InterproScan.

• Crp-like helix-turn-helix domain (HTH_Crp_2) (152-218)

• Cyclic nucleotide-binding domain (cNMP_binding) (33-120)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Acinetobacter baumannii D1279779	99.574	100	0.996
crp	Vibrio cholerae strain A1552	47.343	88.085	0.417
crp	Haemophilus influenzae Rd KW20	48.705	82.128	0.4