Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | AM457_RS02610 | Genome accession | NZ_CP026761 |
| Coordinates | 555865..556347 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046489.1 | Uniprot ID | A0A0J0ZLV7 |
| Organism | Acinetobacter baumannii strain AR_0078 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 550865..561347
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM457_RS02575 (AM457_02575) | - | 550972..552006 (+) | 1035 | WP_001189449.1 | lipase secretion chaperone | - |
| AM457_RS02580 (AM457_02580) | - | 552121..553062 (+) | 942 | WP_085941363.1 | lipase family alpha/beta hydrolase | - |
| AM457_RS02585 (AM457_02585) | rplS | 553115..553483 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AM457_RS02590 (AM457_02590) | trmD | 553691..554431 (-) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AM457_RS02595 (AM457_02595) | rimM | 554477..555025 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AM457_RS02600 (AM457_02600) | rpsP | 555045..555296 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AM457_RS02605 (AM457_02605) | pilE | 555443..555868 (-) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| AM457_RS02610 (AM457_02610) | pilY2 | 555865..556347 (-) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| AM457_RS02615 (AM457_02615) | pilY1 | 556358..560212 (-) | 3855 | WP_000768953.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| AM457_RS02620 (AM457_02620) | pilX | 560224..561042 (-) | 819 | WP_000149370.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17657.94 Da Isoelectric Point: 8.4737
>NTDB_id=272263 AM457_RS02610 WP_001046489.1 555865..556347(-) (pilY2) [Acinetobacter baumannii strain AR_0078]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=272263 AM457_RS02610 WP_001046489.1 555865..556347(-) (pilY2) [Acinetobacter baumannii strain AR_0078]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
96.25 |
100 |
0.963 |
| comE | Acinetobacter baylyi ADP1 |
41.86 |
100 |
0.45 |