Detailed information NTG0027149

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: MAQU_RS04430
• Genome accession: NC_008740
• Coordinates: 992469..993863 (-)
• Length: 464 a.a.
• NCBI ID: WP_011784392.1
• Uniprot ID: A1TZ01
• Organism: Marinobacter nauticus VT8
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 987469..998863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MAQU_RS04410 (Maqu_0870)	-	987851..988225 (+)	375	WP_041656181.1	hypothetical protein	-
MAQU_RS04415 (Maqu_0871)	-	988222..991392 (+)	3171	WP_011784389.1	pilus assembly protein	-
MAQU_RS04420 (Maqu_0872)	-	991389..991847 (+)	459	WP_011784390.1	type IV pilin protein	-
MAQU_RS04425 (Maqu_0873)	-	991860..992414 (-)	555	WP_041656184.1	GspH/FimT family pseudopilin	-
MAQU_RS04430 (Maqu_0874)	pilR	992469..993863 (-)	1395	WP_011784392.1	sigma-54-dependent transcriptional regulator	Regulator
MAQU_RS04435 (Maqu_0875)	-	993913..995559 (-)	1647	WP_011784393.1	sensor histidine kinase	-
MAQU_RS04440 (Maqu_0876)	-	995652..997316 (+)	1665	WP_011784394.1	NAD+ synthase	-
MAQU_RS04445 (Maqu_0877)	-	997325..998158 (-)	834	WP_011784395.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 51170.41 Da
• Isoelectric Point: 4.7088

>NTDB_id=27149 MAQU_RS04430 WP_011784392.1 992469..993863(-) (pilR) [Marinobacter nauticus VT8]
MTTQTALIVDDEPDIRDLLEITLTRMGITTYTAPDLASARELLQQHNPQLCLTDMNLPDGNGIDLVHWIQQHTPCTPVAV
ITAYGSMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLSEPQTGETAESDEPGLLLGDSPQIRKLRTQTKKLARSQA
PVFISGESGSGKELVARMIHLQGPRSDGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKQGLFRSADGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGDFRQDLFYRINVIELAVPPLRERAEDIPLLA
EHILQRIAREYECDPAKLTPAAIQRLQGYEFPGNVRELENILERAFTLCDEDLIDASDLHLGGGACLPARAATEPTLPDQ
TSEAQQPIAVPEGEIDLEYYLEGLERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME

Nucleotide

• Length: 1395 bp

>NTDB_id=27149 MAQU_RS04430 WP_011784392.1 992469..993863(-) (pilR) [Marinobacter nauticus VT8]
ATGACTACACAGACAGCGCTGATTGTTGACGACGAGCCGGATATCCGGGATCTACTGGAAATCACCCTCACCCGGATGGG
CATTACCACCTACACCGCCCCCGATCTGGCCAGCGCCAGGGAACTACTGCAGCAGCACAATCCCCAGCTCTGCCTGACAG
ACATGAACCTGCCCGACGGCAATGGTATAGACCTTGTTCACTGGATTCAGCAACACACTCCCTGCACCCCCGTTGCAGTG
ATCACCGCCTATGGCAGCATGGACACGGCTATCGAATCGCTCAAAGCCGGCGCTTTTGACTTCGTATCCAAGCCCGTGGA
GCTGCCCCGCCTGCGGGAACTGGTCAACAGCGCTCTGAAGCTGTCAGAACCCCAGACCGGCGAAACCGCCGAGTCCGATG
AGCCCGGCCTGCTTCTGGGCGACTCGCCGCAAATCCGGAAACTGCGCACACAGACGAAAAAGCTCGCCAGAAGTCAGGCA
CCGGTGTTTATCAGCGGCGAATCCGGCAGCGGCAAGGAGCTGGTCGCCCGCATGATTCACCTGCAAGGCCCCAGAAGTGA
CGGCCCCTTTATCGCAGTGAACTGTGGCGCAATCCCCTCGGAATTGATGGAAAGCGAGTTCTTTGGCCACAAGAAGGGCA
GCTTCACCGGAGCCGTCGAGAACAAGCAGGGCCTGTTCCGCTCTGCCGATGGTGGCACCCTGTTTCTGGACGAAGTGGCC
GACCTCCCACTGGCCATGCAGGTAAAACTGCTGCGTGCTATCCAGGAGAAAGCCGTCCGCCCGGTCGGCGATACCAAAGA
AGTGCCGGTGGACATCCGGGTGCTCAGCGCCACCCACAAAAACCTCCCGGAACTGGTGCAGGAAGGCGACTTCCGCCAGG
ATCTGTTCTACCGGATCAACGTCATCGAACTGGCCGTTCCGCCGCTGCGCGAGCGCGCCGAGGATATTCCCTTGCTGGCC
GAGCACATTCTCCAACGCATAGCGCGGGAATACGAATGCGACCCGGCTAAGCTCACCCCGGCCGCCATCCAGCGCCTGCA
GGGTTACGAGTTCCCGGGCAACGTGCGGGAACTGGAGAATATCCTGGAGCGGGCTTTTACACTGTGCGACGAAGACCTGA
TAGACGCCAGCGACCTGCACCTTGGAGGCGGTGCCTGCCTGCCAGCCCGGGCTGCAACGGAGCCAACGCTGCCTGATCAG
ACATCAGAAGCGCAGCAACCCATCGCTGTGCCGGAAGGCGAAATTGATCTGGAATATTACCTGGAGGGCCTGGAGCGGCA
AGCCATTGAAAAGGCGCTCGAGGCAACCCGCTGGAACAAAACCGCAGCGGCCAAGCGCCTGGGAATCAGCTTTCGGGCAT
TGCGGTACCGGTTGAAGAAGTTGGGAATGGAGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (421-461)

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (139-304)

3D structure

• AlphaFold DB: A1TZ01

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	64.301	100	0.644
pilR	Acinetobacter baumannii strain A118	53.664	100	0.537
luxO	Vibrio cholerae strain A1552	37.174	99.138	0.369