Detailed information NTG0270925

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: C3Y93_RS14015
• Genome accession: NZ_CP026616
• Coordinates: 2906462..2908897 (+)
• Length: 811 a.a.
• NCBI ID: WP_104853215.1
• Uniprot ID: -
• Organism: Acinetobacter sp. SWBY1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2905646..2913608	2906462..2908897	within	0

Gene organization within MGE regions

Location: 2905646..2913608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C3Y93_RS14010 (C3Y93_14010)	lolD	2905646..2906329 (+)	684	WP_104853214.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
C3Y93_RS14315	-	2906326..2906553 (-)	228	WP_154648271.1	hypothetical protein	-
C3Y93_RS14015 (C3Y93_14015)	comA/comEC	2906462..2908897 (+)	2436	WP_104853215.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
C3Y93_RS14020 (C3Y93_14020)	-	2908854..2909843 (-)	990	WP_004971822.1	lysophospholipid acyltransferase family protein	-
C3Y93_RS14025 (C3Y93_14025)	sppA	2909971..2910993 (+)	1023	WP_004971820.1	signal peptide peptidase SppA	-
C3Y93_RS14030 (C3Y93_14030)	-	2910990..2911808 (+)	819	WP_004971819.1	alpha/beta fold hydrolase	-
C3Y93_RS14035 (C3Y93_14035)	purN	2911898..2912527 (-)	630	WP_104853305.1	phosphoribosylglycinamide formyltransferase	-
C3Y93_RS14040 (C3Y93_14040)	purM	2912538..2913608 (-)	1071	WP_104853216.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 811 a.a.
• Molecular weight: 92544.76 Da
• Isoelectric Point: 8.6958

>NTDB_id=270925 C3Y93_RS14015 WP_104853215.1 2906462..2908897(+) (comA/comEC) [Acinetobacter sp. SWBY1]
MLQLIGLAWVIGIACVGIRSSSFPIHSLTSMPSAMVLLILCSIVVQYLLQARLSSIYWKCLNVGVAGVLSLVFGLIYADT
QMQQRLQWRELQPEFAEVVVYVRQLNQLNDNSISQRVEVLNRHPQTVTWLATLAQTQVDQEQNLELGHYYKLSGKIRPAH
SYATAGAFDVERWYLQQNIMSGFRVEQIQPISAEQIYAMGFTQHWRAQQTLWAKFRLWIEQQRYQIRLFIQQQPLHHQGL
ILALLTGDKSLLDAETEAQFQRFGISHLLAISGPHVLIFAGMLCWALRQLIRYYRPHWYLWMPKQYLLMLPFLSCVLLYT
AFVGFEIPALRTLLMCSLVTVMLVLKQKLQGFALLIYSAALLLWFDPLSVLSAAFWLSYGACFILLRIYQSLSAQPRIEL
NRWQQLKHASKILIESQWKIFIALFPLVIVFFKQVAWIAPLINIIAIPLIGMLIVPLDVLAGICFFIFEPLASILFQLND
LAMALLRLIFRGMETVFVPRLHTLSMSAAVYVCLCLGLFLLFLPQSVLPKTWAILCFVPLIIVDSQRQPFELTVLDVGQG
QALFLRSGHYNMMIDVGGSYDESKFSIGQQILRPFLAVHGIKQLDLVVLSHLDQDHSGAFPHLQNEVNIQHVFANQTVDV
AVNSKFNLCQQGQQWSLPHQVQIQVLSPKPSQLPYAAQQQNELSCVLYISVPSAQPYQHFLVMGDAGWATEYQLLQEYPD
LKVDVLILGHHGSKHSSAYDFLAHFKPKLAVASAGFDNRYGHPSSLVQQRLAALNIPFMNTIQQGSVRFSVDAQQRMLIQ
PYRQQKLWLQR

Nucleotide

• Length: 2436 bp

>NTDB_id=270925 C3Y93_RS14015 WP_104853215.1 2906462..2908897(+) (comA/comEC) [Acinetobacter sp. SWBY1]
ATGCTGCAATTGATTGGTCTGGCTTGGGTGATTGGGATCGCCTGTGTCGGAATACGTTCTTCTTCTTTTCCAATACATTC
ATTGACTTCCATGCCTAGTGCAATGGTTTTACTGATTTTATGCAGTATCGTTGTGCAATACTTGTTGCAAGCTCGCTTAT
CTTCAATCTATTGGAAATGTTTGAATGTAGGAGTGGCAGGTGTTTTGAGTCTTGTTTTCGGTTTGATCTATGCGGATACG
CAGATGCAGCAGCGTTTGCAATGGCGTGAACTACAACCTGAATTTGCTGAAGTCGTGGTTTATGTCAGACAGTTAAATCA
GCTAAATGACAACAGCATTTCACAAAGGGTTGAGGTGTTAAACCGACATCCTCAAACAGTGACATGGTTAGCAACTTTAG
CACAAACTCAGGTAGATCAAGAGCAAAATTTAGAACTTGGACACTATTACAAATTAAGTGGAAAAATTCGCCCTGCGCAT
AGTTATGCCACAGCAGGTGCATTTGATGTAGAGCGGTGGTATTTACAGCAAAATATTATGAGTGGTTTTCGGGTTGAGCA
GATTCAGCCTATCTCGGCTGAACAAATTTATGCCATGGGGTTTACACAACATTGGCGTGCCCAACAGACGCTATGGGCAA
AATTTCGATTATGGATTGAACAGCAGCGTTATCAAATTCGACTGTTTATTCAGCAGCAACCTTTGCATCATCAAGGTTTA
ATTCTTGCATTACTCACAGGAGATAAAAGCCTATTAGATGCAGAAACTGAAGCACAGTTTCAGCGTTTTGGAATTAGCCA
CTTATTGGCTATTTCAGGGCCACATGTGCTGATTTTTGCAGGCATGCTATGTTGGGCATTACGTCAGCTGATTAGGTATT
ACCGTCCGCATTGGTATTTGTGGATGCCTAAACAATACTTGCTCATGTTGCCATTTTTAAGTTGTGTATTGCTGTACACC
GCCTTTGTCGGTTTTGAAATTCCTGCATTAAGAACCTTGCTGATGTGCAGTCTAGTGACAGTAATGTTAGTGCTGAAGCA
GAAGCTTCAAGGCTTTGCCTTGCTGATTTATAGTGCTGCCTTATTATTATGGTTTGATCCTTTAAGTGTACTGTCTGCTG
CTTTTTGGCTGTCTTACGGGGCCTGTTTTATTCTACTGCGTATTTATCAGAGCTTGAGTGCGCAACCACGTATAGAGCTG
AATCGTTGGCAGCAACTGAAACATGCCAGCAAAATTCTAATCGAGTCGCAATGGAAAATTTTTATTGCCTTATTTCCTTT
GGTGATTGTGTTTTTTAAACAAGTGGCGTGGATTGCACCGCTTATTAATATCATCGCAATTCCATTGATTGGTATGCTGA
TCGTGCCTTTAGATGTTTTGGCAGGAATTTGCTTTTTTATTTTTGAACCCTTGGCGTCAATACTGTTTCAATTGAATGAT
CTAGCTATGGCTTTGTTGCGCTTGATTTTTCGGGGGATGGAAACCGTTTTTGTACCACGGTTACATACTTTGTCGATGTC
TGCAGCGGTGTATGTCTGTCTATGTTTAGGCTTATTTCTGCTATTTTTACCACAATCGGTATTGCCTAAAACTTGGGCAA
TCTTATGTTTTGTTCCACTGATTATAGTCGATAGCCAACGACAACCATTTGAATTAACAGTACTCGATGTGGGGCAGGGA
CAAGCTTTATTTTTACGTTCAGGTCATTACAACATGATGATTGATGTGGGCGGTTCTTATGATGAAAGTAAGTTTAGTAT
TGGACAGCAAATTTTACGTCCATTTTTAGCGGTGCATGGTATTAAACAACTGGACTTGGTGGTTTTAAGTCATTTAGACC
AAGACCATAGTGGTGCATTTCCTCATTTGCAAAATGAAGTCAATATTCAGCATGTCTTTGCCAATCAGACCGTAGATGTG
GCAGTAAATAGCAAGTTTAATTTGTGTCAGCAAGGGCAACAGTGGTCTTTACCACATCAGGTACAGATACAAGTTTTATC
TCCTAAACCGAGTCAATTACCTTATGCCGCACAGCAACAAAATGAGTTGTCATGTGTGTTGTATATTTCAGTGCCATCCG
CACAGCCATATCAGCATTTTTTAGTGATGGGCGATGCAGGTTGGGCAACTGAATATCAATTGTTGCAGGAATATCCTGAT
TTAAAAGTAGATGTGTTAATTTTGGGTCATCATGGGAGTAAGCACAGTTCTGCCTATGATTTTTTAGCACATTTTAAACC
CAAATTGGCCGTGGCATCTGCAGGTTTTGATAATCGTTATGGACATCCTAGTTCTTTAGTTCAGCAACGCTTGGCTGCGC
TCAATATTCCGTTCATGAACACCATACAACAAGGCAGCGTACGTTTTTCTGTAGATGCACAACAGCGTATGCTTATACAG
CCGTATCGGCAGCAGAAATTGTGGTTGCAGCGTTAG

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (556-629)

• Competence protein (Competence) (244-524)

• Domain of unknown function (DUF4131) (DUF4131) (33-189)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	47.853	100	0.481
comA/comEC	Acinetobacter baumannii strain A118	47.485	100	0.477
comA/comEC	Acinetobacter baylyi ADP1	46.267	100	0.466