Detailed information NTG0027077

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: SGO_RS06950
• Genome accession: NC_009785
• Coordinates: 1469346..1470002 (-)
• Length: 218 a.a.
• NCBI ID: WP_008809355.1
• Uniprot ID: A8AY37
• Organism: Streptococcus gordonii str. Challis substr. CH1
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 1464346..1475002

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGO_RS06945 (SGO_1416)	-	1467988..1469349 (-)	1362	WP_012130501.1	sensor histidine kinase	-
SGO_RS06950 (SGO_1417)	scnR	1469346..1470002 (-)	657	WP_008809355.1	response regulator transcription factor	Regulator
SGO_RS06955 (SGO_1418)	-	1470021..1471238 (-)	1218	WP_008809356.1	ABC transporter permease	-
SGO_RS06960 (SGO_1419)	-	1471246..1471926 (-)	681	WP_008809357.1	ABC transporter ATP-binding protein	-
SGO_RS06965 (SGO_1420)	-	1471913..1473166 (-)	1254	WP_012130502.1	efflux RND transporter periplasmic adaptor subunit	-
SGO_RS06970 (SGO_1421)	-	1473197..1473460 (-)	264	WP_008809359.1	hypothetical protein	-
SGO_RS06975 (SGO_1422)	-	1473735..1474745 (+)	1011	WP_012130503.1	lactonase family protein	-

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24915.92 Da
• Isoelectric Point: 4.7477

>NTDB_id=27077 SGO_RS06950 WP_008809355.1 1469346..1470002(-) (scnR) [Streptococcus gordonii str. Challis substr. CH1]
MYKILVVEDDTTINQVICEFLKESNYSVTPVYDGAEALRQFEEETFDLVILDMMLPSVSGLDVLKEIRKTSQIPVMILTA
LDDEYTQLVSFNHLISDYVTKPFSPLILVKRIENILRRTAVYSEIVIGDLRVVLEDCTIFWQGEKLALTKKEYEILEVLA
KRKGHLVTRDQLMNTIWGYSELDSRVLDNHIKNIRKKVPGIPLSTITGMGYQLGGDQA

Nucleotide

• Length: 657 bp

>NTDB_id=27077 SGO_RS06950 WP_008809355.1 1469346..1470002(-) (scnR) [Streptococcus gordonii str. Challis substr. CH1]
ATGTATAAGATTTTGGTCGTAGAAGATGATACTACTATCAACCAAGTCATATGTGAATTTTTAAAAGAAAGTAACTACAG
TGTTACGCCGGTTTATGATGGCGCAGAGGCTCTACGTCAGTTTGAAGAAGAGACTTTTGATTTAGTCATTTTAGATATGA
TGTTGCCATCCGTTAGTGGTTTAGATGTCCTCAAGGAAATCCGTAAGACATCGCAGATCCCAGTCATGATTTTAACTGCT
CTAGATGATGAATATACCCAGCTAGTGAGTTTTAATCACTTGATTAGCGATTACGTGACTAAGCCTTTTTCACCCCTCAT
TTTGGTGAAAAGAATAGAAAATATTTTACGTCGGACTGCTGTTTATTCTGAAATTGTCATCGGTGACTTGCGCGTGGTTT
TAGAAGATTGTACGATTTTCTGGCAAGGAGAAAAGCTAGCTCTGACCAAGAAGGAGTATGAAATTCTAGAAGTTCTTGCT
AAACGTAAGGGCCATTTAGTGACAAGAGACCAGCTTATGAATACCATTTGGGGCTATAGTGAGCTAGATAGTCGTGTCTT
GGACAATCATATCAAGAATATTCGCAAGAAAGTTCCTGGAATTCCTTTGTCAACCATTACTGGTATGGGCTATCAATTGG
GTGGAGATCAGGCGTGA

Domains

Predicted by InterProScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (143-213)

• Response regulator receiver domain (Response_reg) (4-112)

3D structure

• AlphaFold DB: A8AY37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	38.938	100	0.404
micA	Streptococcus pneumoniae Cp1015	37.391	100	0.394
vicR	Streptococcus mutans UA159	36.797	100	0.39