Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   C3F22_RS08490 Genome accession   NZ_CP026420
Coordinates   1718468..1719175 (-) Length   235 a.a.
NCBI ID   WP_104426294.1    Uniprot ID   A0A2L0I5L4
Organism   Acinetobacter sp. ACNIH1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1713468..1724175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3F22_RS08475 (C3F22_08485) clpB 1713880..1716459 (-) 2580 WP_104426292.1 ATP-dependent chaperone ClpB -
  C3F22_RS08480 (C3F22_08490) - 1716714..1717079 (-) 366 WP_005235031.1 MbcA/ParS/Xre antitoxin family protein -
  C3F22_RS08485 (C3F22_08495) - 1717225..1718274 (-) 1050 WP_104426293.1 NADP(H)-dependent aldo-keto reductase -
  C3F22_RS08490 (C3F22_08500) crp 1718468..1719175 (-) 708 WP_104426294.1 cAMP-activated global transcriptional regulator CRP Regulator
  C3F22_RS08495 (C3F22_08505) - 1719323..1719745 (+) 423 WP_104426295.1 OsmC family protein -
  C3F22_RS08500 (C3F22_08510) - 1719789..1720832 (-) 1044 WP_104426296.1 metallophosphoesterase -
  C3F22_RS08505 (C3F22_08515) - 1721079..1723316 (-) 2238 WP_104426297.1 NADP-dependent isocitrate dehydrogenase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26342.10 Da        Isoelectric Point: 4.7380

>NTDB_id=269230 C3F22_RS08490 WP_104426294.1 1718468..1719175(-) (crp) [Acinetobacter sp. ACNIH1]
MTSNFSQLSTDALSPGQLPVSVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANPQRTAEVRTRDVCEIAEITYENFHEISKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEEPEVLGAGEFEDE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=269230 C3F22_RS08490 WP_104426294.1 1718468..1719175(-) (crp) [Acinetobacter sp. ACNIH1]
ATGACTTCAAACTTTTCACAATTAAGCACAGACGCACTTTCGCCGGGGCAACTACCTGTATCAGTGAAAGCGTTATTAAA
ACGTGCATATATCAATCGCTATCCAAAACGTACCACGATCGTGGATGCAGGGTCAGAATCTAAATCTCTGTATTTAATTC
TGAAGGGGTCTGTGTCTATCATTCTTCGTGAAGATGATGAACGTGAGATTGTGGTAGCTTATTTAAATGCGGGAGACTTC
TTTGGGGAAATGGGTCTTTTCGAAGCAAATCCACAGCGTACTGCGGAAGTGCGTACTCGTGATGTCTGTGAAATTGCTGA
AATTACCTATGAAAACTTTCATGAAATTAGCAAACAATATCCAGACCTTAGCTATGCAGTTTTTGCTCAGCTGGTTCGCC
GTCTGAAAAATACCACACGTAAAGTGACTGACCTGGCATTTATTGATGTGTCTGGTCGTATCGCGCGTTGTCTGATTGAC
CTGTCATCTCAGCCAGAAGCGATGATCTTGCCAAATGGTCGTCAAATCCGTATTACCCGTCAGGAAATCGGCCGTATTGT
AGGCTGTTCACGTGAAATGGTCGGTCGTGTTCTAAAAACTCTAGAAGAACAGGGCATGATTGAAACCGATGGTAAGGCGA
TTCTGATTTTTGATGCATCGCTGGAAGAACCTGAAGTACTGGGTGCTGGCGAGTTCGAAGACGAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, crp family (Crp)

(176-207)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L0I5L4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

93.805

96.17

0.902
  crp Vibrio cholerae strain A1552

46.829

87.234

0.409
  crp Haemophilus influenzae Rd KW20

47.692

82.979

0.396

Multiple sequence alignment