Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   C3F34_RS11155 Genome accession   NZ_CP026412
Coordinates   2377502..2381989 (+) Length   1495 a.a.
NCBI ID   WP_104441617.1    Uniprot ID   A0A2L0HW60
Organism   Acinetobacter sp. ACNIH2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2372502..2386989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3F34_RS11130 (C3F34_11130) - 2372988..2373581 (-) 594 WP_416333172.1 hypothetical protein -
  C3F34_RS11135 (C3F34_11135) pilG 2373913..2374296 (+) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  C3F34_RS11140 (C3F34_11140) - 2374317..2374685 (+) 369 WP_016167069.1 response regulator -
  C3F34_RS11145 (C3F34_11145) - 2374689..2375225 (+) 537 WP_016167068.1 chemotaxis protein CheW -
  C3F34_RS11150 (C3F34_11150) - 2375273..2377345 (+) 2073 WP_016167067.1 methyl-accepting chemotaxis protein -
  C3F34_RS11155 (C3F34_11155) chpA 2377502..2381989 (+) 4488 WP_104441617.1 Hpt domain-containing protein Regulator
  C3F34_RS11160 (C3F34_11160) - 2381994..2382458 (+) 465 WP_016167065.1 hypothetical protein -
  C3F34_RS11165 (C3F34_11165) dapE 2382523..2383656 (-) 1134 WP_044738274.1 succinyl-diaminopimelate desuccinylase -
  C3F34_RS11170 (C3F34_11170) - 2383772..2383912 (-) 141 WP_016167063.1 entericidin A/B family lipoprotein -
  C3F34_RS11175 (C3F34_11175) - 2384028..2384906 (-) 879 WP_104441618.1 DUF1853 family protein -
  C3F34_RS11180 (C3F34_11180) - 2385003..2385377 (+) 375 WP_016167061.1 YbaN family protein -
  C3F34_RS11185 (C3F34_11185) elsL 2385419..2385925 (+) 507 WP_016167060.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1495 a.a.        Molecular weight: 168131.75 Da        Isoelectric Point: 4.3741

>NTDB_id=269199 C3F34_RS11155 WP_104441617.1 2377502..2381989(+) (chpA) [Acinetobacter sp. ACNIH2]
MKEILKNLVDTTTLPEDSYLDQDAEILEIFVEEIEEIFEELDTIFEQWLANPSDQDTLTIIRRHFHTLKGSGRMVGAKSA
GEVAWAVEDTLNRVIFGSVPLELKIQKFAETVYRVFQFKLYPQFKAVKPIEIDLRPLVLLGQQLQQGQSIEPALEELLSL
ADQLRSPDDLTGLELNSSQAEIALVEEAVVAESSDLQEVTTSIFIEEAEEHLATIDRFLKQDTDEVLDYNGLIRALHTLR
GSSSMAHIQQIFDASSKVENLFKTLLQEEIVSTSNETALLIQYAEFVRDYLHILRQGKVENLNQIDQTFNQAWENYGFNQ
EEFESSANPQGLVSKLIELDIDLLLDAELEFEKRIKNEFPIYVEQLSQKANLLAEHTNNRASQGIHDFIQVLDKCYQALL
AKPTLLNIDYAYELFAQAHQEFIYLFDTLAAGQRISLSTPAEQVLQNLTAFVQQDLEIFDSVEENPSVENTSELETELMS
ESGPQTAVVDFAALSKRLHSDAKLVDTDEANRQFDDDLLDIFLEEADELLMGIDQDVHTWSSDQSNTAALNNLMRYLHTL
KGGANMIQATHIGLIAHELETIYERIINQQIQASPALIQIVRLVQDNIADRIQTIREEKVDYPAPEAIDILNNIHALVAG
AVVSTDTEVVTEQKLPAVEHVAVYEAATNEPPVVQPVHAEVSSFEEESETPDWVEPVPQPNTVEPSVQDVESLAFDESVR
SIVEETFFEEAAEIFDTMEKLLQNWFEQRSDRSLLLQLQRAAHSLKGGARMVEIEPVGAIAYRLESAFEQFAVHHFNSNI
YDPLLKTTITWLRHAIFDHDYSNFDSLKAGLEAIEYADVTVQLPTRNSPDYAPITAPSFEFIQGDGTEPPAMMGEWESFG
ANDQSNEMIRISADLIEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSEGGRY
ADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDTEGLLLQQSRIQAEIQEGLMRTRLVPFSRLLPRLQRIVR
QTASTLNRPAELIVNNTEGELDRTILERLVTPLEHMLRNAIDHGIEDPEQRQSANKPEIGKIELNISRQGTDVVVEFHDD
GKGIDVNRIKEKAISLGLMKADQLLEKEEILQLIFHPGFSTAQQITQISGRGVGLDVVQSSIKALGGHVTVDSTLGKGTS
FSIRVPTTVAVSDALMVKSGDQQFAIPLAQIERIIRIAPTTLETYFNSKEDYFKIDNQSYKLRYLSEFVSNQPLPRLSNI
AHSLPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPIGQQFAAIGAIAGATILGDGQVCLILDGQNIARQVQTTQRVKHGH
DQRDSYRYSNTRRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLIRH
HEVHKQLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLNNIESLLTVKQG

Nucleotide


Download         Length: 4488 bp        

>NTDB_id=269199 C3F34_RS11155 WP_104441617.1 2377502..2381989(+) (chpA) [Acinetobacter sp. ACNIH2]
ATGAAAGAAATATTAAAAAATTTAGTCGATACGACAACGCTTCCAGAAGATAGTTATCTTGACCAAGATGCTGAAATTCT
AGAGATCTTTGTAGAAGAAATTGAAGAAATTTTTGAAGAATTAGATACCATTTTTGAACAGTGGTTAGCAAATCCTTCTG
ATCAGGATACTTTAACGATTATTCGACGCCATTTTCATACCTTGAAAGGCTCGGGGCGAATGGTGGGGGCAAAGTCTGCT
GGTGAGGTGGCTTGGGCTGTCGAAGATACTTTAAATCGTGTTATTTTCGGTTCTGTACCTTTAGAGCTTAAGATTCAGAA
ATTTGCTGAAACGGTTTATCGCGTTTTTCAATTTAAGCTTTATCCTCAGTTCAAAGCGGTCAAACCCATAGAAATTGATT
TAAGACCTCTGGTGCTATTGGGGCAGCAGCTACAACAAGGTCAATCAATTGAACCTGCACTTGAAGAATTGTTATCTTTA
GCAGATCAACTCAGATCTCCAGATGATTTGACTGGACTGGAATTAAATTCTTCTCAAGCAGAAATTGCATTGGTGGAAGA
AGCAGTGGTTGCTGAATCAAGCGATCTACAAGAAGTGACGACATCCATTTTCATTGAAGAAGCTGAAGAACATCTTGCAA
CGATTGACCGCTTCTTGAAACAAGATACTGACGAAGTGCTTGATTATAATGGACTGATTCGTGCCTTGCATACTTTGCGT
GGTAGTTCGTCTATGGCGCATATCCAGCAAATTTTTGATGCCAGTTCAAAAGTTGAAAATTTATTTAAGACGCTTTTACA
AGAAGAAATCGTTTCAACTTCAAATGAGACAGCATTACTTATTCAATATGCTGAATTTGTGCGTGACTATTTACATATTT
TACGTCAGGGTAAAGTTGAAAATTTAAATCAAATTGATCAAACATTTAATCAGGCATGGGAAAATTACGGTTTTAATCAA
GAAGAATTTGAATCTAGTGCAAATCCACAAGGTTTGGTATCGAAATTAATAGAATTAGATATTGATCTGTTATTGGATGC
AGAGCTAGAGTTTGAAAAACGCATTAAAAATGAATTTCCTATTTATGTAGAGCAATTAAGTCAAAAAGCGAATTTACTCG
CGGAGCATACCAATAACCGTGCTTCACAAGGGATTCATGATTTTATTCAGGTTTTAGATAAGTGTTACCAAGCTCTTTTA
GCTAAACCAACATTACTCAACATTGACTATGCATATGAGCTATTCGCTCAGGCGCATCAAGAATTTATTTATCTGTTTGA
TACGCTGGCTGCGGGTCAGCGCATAAGTTTATCTACACCAGCAGAACAAGTGCTTCAGAATTTAACTGCATTTGTGCAGC
AAGACCTGGAAATTTTTGATTCAGTTGAAGAAAATCCATCTGTAGAGAATACTTCTGAACTTGAAACAGAGTTAATGAGT
GAGTCTGGCCCTCAGACTGCAGTTGTTGACTTTGCGGCTTTGTCAAAACGCCTGCATAGTGATGCGAAATTAGTTGATAC
AGATGAAGCTAATCGTCAATTTGACGATGATCTTTTGGATATCTTCCTTGAGGAAGCAGATGAGCTACTCATGGGGATTG
ACCAAGATGTACATACATGGAGCAGTGATCAGTCTAATACCGCAGCATTGAATAATTTAATGCGATATTTGCATACCCTG
AAGGGTGGCGCAAATATGATTCAAGCGACGCATATTGGTTTAATTGCACATGAATTAGAAACTATTTATGAACGTATTAT
CAATCAGCAAATTCAGGCATCGCCTGCGCTGATCCAGATTGTTCGTTTAGTTCAAGACAACATTGCTGACCGTATTCAAA
CGATTCGAGAAGAAAAAGTTGATTATCCGGCTCCTGAAGCAATTGATATTTTAAATAATATTCATGCATTGGTTGCTGGT
GCTGTGGTATCTACTGATACGGAAGTGGTTACAGAACAAAAACTGCCTGCTGTTGAACATGTGGCTGTATATGAAGCAGC
GACTAATGAGCCTCCAGTTGTACAGCCTGTACATGCAGAAGTTAGTTCATTTGAAGAAGAATCTGAAACTCCAGATTGGG
TTGAACCCGTACCACAACCGAACACTGTTGAGCCATCAGTTCAAGACGTTGAATCTTTAGCATTTGATGAGAGTGTACGC
TCAATTGTTGAAGAAACATTCTTCGAAGAAGCGGCAGAAATTTTCGATACAATGGAAAAACTGTTGCAGAATTGGTTTGA
GCAACGTAGTGACCGTAGTTTATTGCTTCAATTGCAACGCGCAGCGCACAGCCTCAAAGGTGGTGCACGTATGGTTGAAA
TTGAGCCTGTAGGGGCGATTGCATATCGTTTAGAAAGCGCCTTCGAACAGTTCGCTGTTCATCACTTCAATTCAAATATT
TATGATCCACTACTCAAAACCACGATTACATGGTTAAGACATGCTATTTTTGATCATGATTATAGTAATTTTGACAGTTT
AAAAGCAGGTTTGGAAGCGATTGAATATGCAGATGTTACTGTTCAATTACCAACGCGAAACAGCCCTGATTATGCACCAA
TAACTGCACCAAGCTTTGAGTTTATTCAAGGGGATGGAACAGAGCCACCAGCTATGATGGGTGAGTGGGAAAGTTTTGGG
GCCAATGATCAATCGAATGAAATGATTCGAATTTCAGCAGATTTGATTGAGAAAATGATTGATTTATCTGGTGAAAATTC
GATTAACCGTTCACGTATTGAAATGGATCTTGGTCAATTAGGCAATACATTGAATGAAATGGAATTGGCAATTAAGCGTC
TTGCCGACCAGTTGCGTCGAATGGAAGGTGAATTAGAGTCACAAATTATTGCCAAACATGGCAGTGAAGGCGGGCGATAT
GCCGACTTTGACCCATTGGAAATGGACCAATATTCATCATTAAATCAGTTGTCTAAATCCTTGGCGGAATCTGCATCCGA
CTTGGTCGACTTCAAGAGTACATTGGCTGAGAAAATTCGTGATACAGAGGGTTTGTTATTACAGCAATCCCGTATTCAGG
CCGAAATTCAAGAAGGCTTAATGCGAACTCGCTTGGTTCCATTCTCACGCTTATTGCCTCGTTTGCAACGTATTGTGCGT
CAGACTGCTTCAACTCTAAACCGGCCTGCTGAGTTAATTGTAAATAATACTGAAGGTGAGTTGGATCGTACTATTCTTGA
GCGTTTAGTTACGCCGCTTGAGCATATGTTACGAAATGCCATCGACCATGGTATTGAAGATCCTGAGCAGCGTCAGTCGG
CAAACAAACCTGAAATTGGGAAAATTGAACTCAATATCAGCCGTCAAGGTACGGATGTTGTAGTCGAATTCCATGACGAT
GGTAAAGGGATTGACGTAAATCGAATCAAGGAAAAAGCCATTTCTTTAGGTTTGATGAAAGCAGATCAATTACTTGAAAA
AGAAGAAATTTTACAGTTGATTTTCCATCCAGGTTTTAGTACTGCACAGCAAATTACCCAAATTTCTGGGCGAGGCGTTG
GTCTGGATGTCGTACAAAGCTCGATTAAGGCGTTGGGTGGTCATGTCACTGTAGATTCAACCCTTGGAAAAGGAACAAGT
TTTAGTATCCGCGTTCCAACGACTGTAGCAGTAAGTGATGCCTTAATGGTGAAATCTGGGGATCAGCAATTTGCAATTCC
TTTGGCACAAATTGAGCGCATCATTCGAATTGCACCAACGACTTTGGAAACTTACTTTAATAGTAAAGAAGATTATTTCA
AAATTGATAACCAAAGCTATAAGTTACGTTATCTTTCTGAATTTGTTTCCAATCAGCCTTTACCGCGTTTAAGCAATATT
GCTCATTCGTTACCTGTATTGTTGATTAAGGGTAATAGTGGTCAAACGATTGCCTTATTGGTTGATCAGTTGATCGGCTC
ACGTGCGCAAATTGTCGTGAAACCAATTGGCCAGCAATTTGCTGCAATTGGTGCGATAGCAGGTGCAACGATTCTAGGTG
ATGGACAAGTGTGTTTGATTCTGGATGGACAAAATATTGCCCGTCAAGTGCAAACCACACAACGTGTGAAACATGGCCAT
GATCAACGTGATTCTTATCGTTATAGCAATACACGTCGTTTAATCATGATTGTCGATGACTCGGTTACAGTACGTAAAGT
TACTTCACGTCTATTAGAGCGCCAAGGTTATGATGTCGTCACTGCGAAAGATGGTGTGGATGCCATGGAGCAGTTAGAAA
ATGTCAAACCTGATTTAATGCTGTTAGATATTGAAATGCCACGTATGGACGGATTTGAAGTAACTAACTTAATTCGTCAC
CACGAAGTTCATAAGCAACTCCCAATTATCATGATTACATCACGTACGGGTGAAAAGCATCGTGAACGAGCATTTAGTTT
GGGTGTAACTCATTATATGGGTAAACCATTCCAAGAGGCTGAATTGTTGAATAACATAGAAAGTCTTTTGACTGTGAAAC
AGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.122

100

0.619


Multiple sequence alignment