Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C3F34_RS11135 Genome accession   NZ_CP026412
Coordinates   2373913..2374296 (+) Length   127 a.a.
NCBI ID   WP_004723803.1    Uniprot ID   A0A077L426
Organism   Acinetobacter sp. ACNIH2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2368913..2379296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3F34_RS11125 (C3F34_11125) - 2371863..2372960 (-) 1098 WP_104441616.1 efflux RND transporter periplasmic adaptor subunit -
  C3F34_RS11130 (C3F34_11130) - 2372988..2373581 (-) 594 WP_416333172.1 hypothetical protein -
  C3F34_RS11135 (C3F34_11135) pilG 2373913..2374296 (+) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  C3F34_RS11140 (C3F34_11140) - 2374317..2374685 (+) 369 WP_016167069.1 response regulator -
  C3F34_RS11145 (C3F34_11145) - 2374689..2375225 (+) 537 WP_016167068.1 chemotaxis protein CheW -
  C3F34_RS11150 (C3F34_11150) - 2375273..2377345 (+) 2073 WP_016167067.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14227.30 Da        Isoelectric Point: 4.7172

>NTDB_id=269198 C3F34_RS11135 WP_004723803.1 2373913..2374296(+) (pilG) [Acinetobacter sp. ACNIH2]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=269198 C3F34_RS11135 WP_004723803.1 2373913..2374296(+) (pilG) [Acinetobacter sp. ACNIH2]
ATGGACGATAAATTTCAAAATCTAAAAGTCATGGTAATTGATGATTCAAAAACCATTCGCCGTACAGCAGAAACATTATT
ACAACGTGAAGGTTGTGAAGTTGTTACCGCAGTAGATGGTTTTGAGGCTTTATCAAAGATTGCTGAAGCAAATCCAGATA
TTGTTTTTGTCGACATCATGATGCCACGTCTAGATGGCTATCAAACTTGTGCATTGATTAAAAATTCGCAAAATTATCAA
AATATTCCTGTCATTATGCTATCGAGTAAAGATGGTTTATTTGATCAGGCTAAAGGACGTGTTGTCGGTTCTGATGAATA
TTTAACAAAACCATTCAGTAAAGATGAACTTTTAAACGCAATTCGTAATCACGTAACAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077L426

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment