Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | BV11031_RS05590 | Genome accession | NZ_CP026362 |
| Coordinates | 1027746..1028783 (+) | Length | 345 a.a. |
| NCBI ID | WP_010328245.1 | Uniprot ID | - |
| Organism | Bacillus vallismortis strain DSM 11031 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1022746..1033783
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV11031_RS05565 (BV11031_05535) | - | 1023467..1024420 (+) | 954 | WP_010328242.1 | magnesium transporter CorA family protein | - |
| BV11031_RS05570 (BV11031_05540) | - | 1024485..1024895 (+) | 411 | WP_010328018.1 | CBS domain-containing protein | - |
| BV11031_RS05575 (BV11031_05545) | - | 1025040..1026392 (-) | 1353 | WP_129550697.1 | IS1182 family transposase | - |
| BV11031_RS05585 (BV11031_05555) | comGA | 1026689..1027759 (+) | 1071 | WP_010328244.1 | competence protein ComGA | Machinery gene |
| BV11031_RS05590 (BV11031_05560) | comGB | 1027746..1028783 (+) | 1038 | WP_010328245.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BV11031_RS05595 (BV11031_05565) | comGC | 1028797..1029093 (+) | 297 | WP_010328246.1 | comG operon protein ComGC | Machinery gene |
| BV11031_RS05600 (BV11031_05570) | comGD | 1029083..1029511 (+) | 429 | WP_010328247.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BV11031_RS05605 (BV11031_05575) | comGE | 1029495..1029842 (+) | 348 | WP_010328248.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BV11031_RS05610 (BV11031_05580) | comGF | 1029868..1030251 (+) | 384 | WP_026014434.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BV11031_RS05615 (BV11031_05585) | comGG | 1030252..1030626 (+) | 375 | WP_010328250.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| BV11031_RS05620 (BV11031_05590) | - | 1030698..1030877 (+) | 180 | WP_010328251.1 | YqzE family protein | - |
| BV11031_RS05625 (BV11031_05595) | - | 1030921..1031247 (-) | 327 | WP_026014435.1 | YqzG/YhdC family protein | - |
| BV11031_RS05630 (BV11031_05600) | tapA | 1031516..1032280 (+) | 765 | WP_010328253.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BV11031_RS05635 (BV11031_05605) | - | 1032264..1032836 (+) | 573 | WP_082246288.1 | signal peptidase I | - |
| BV11031_RS05640 (BV11031_05610) | - | 1032899..1033684 (+) | 786 | WP_010328256.1 | TasA family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39897.36 Da Isoelectric Point: 9.8001
>NTDB_id=268813 BV11031_RS05590 WP_010328245.1 1027746..1028783(+) (comGB) [Bacillus vallismortis strain DSM 11031]
MKQIRKTWPLKDQALLLKRLGEMMAGGYTLMDGLRLMKLQLNKRQAAALADVVTRLREGAPFYQVLKSLSFHKEAIGICY
FAVTHGELPSAMIQSGELLERKLAQADELKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSDIYQSMNMKTSRFTDMLFAFF
QHIDLLVILTAFFAAGIGLYYWVVFKKKPPARQMLICVRIPFVGNLIRLFNSYFFSLQLSSLLQSGLSIYDSLNAFKQQT
FLPFYRCEAEQVIERLKAGESIEAAICDSPFYEKDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPVIY
GFVAAMILFVYLSMLLPMYQMMNQI
MKQIRKTWPLKDQALLLKRLGEMMAGGYTLMDGLRLMKLQLNKRQAAALADVVTRLREGAPFYQVLKSLSFHKEAIGICY
FAVTHGELPSAMIQSGELLERKLAQADELKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSDIYQSMNMKTSRFTDMLFAFF
QHIDLLVILTAFFAAGIGLYYWVVFKKKPPARQMLICVRIPFVGNLIRLFNSYFFSLQLSSLLQSGLSIYDSLNAFKQQT
FLPFYRCEAEQVIERLKAGESIEAAICDSPFYEKDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPVIY
GFVAAMILFVYLSMLLPMYQMMNQI
Nucleotide
Download Length: 1038 bp
>NTDB_id=268813 BV11031_RS05590 WP_010328245.1 1027746..1028783(+) (comGB) [Bacillus vallismortis strain DSM 11031]
ATGAAACAGATTAGAAAAACTTGGCCGTTAAAGGATCAAGCCTTGTTATTGAAGCGGCTTGGTGAAATGATGGCGGGCGG
ATATACGCTTATGGATGGATTACGCCTGATGAAACTTCAGTTGAATAAGAGGCAGGCGGCCGCCTTGGCTGACGTGGTCA
CTCGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCTATAGGCATTTGTTAT
TTTGCTGTAACACATGGTGAATTGCCTTCTGCCATGATCCAGAGCGGAGAGCTTCTGGAACGAAAACTGGCACAGGCAGA
CGAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTTACAGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGACATTTATCAATCGATGAATATGAAAACCTCACGTTTTACTGATATGCTTTTCGCTTTTTTT
CAGCATATTGATCTGTTGGTCATTCTGACGGCTTTTTTTGCAGCAGGTATCGGGCTTTATTATTGGGTTGTGTTTAAGAA
AAAACCGCCTGCTCGGCAAATGCTTATTTGTGTCAGGATCCCTTTCGTTGGAAACCTAATCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTACAATCAGGCCTCTCCATTTATGACAGCCTAAATGCATTTAAACAACAAACG
TTTCTCCCTTTTTACCGCTGCGAGGCTGAGCAAGTGATTGAACGGTTAAAAGCTGGTGAATCAATTGAAGCCGCTATTTG
TGACAGCCCTTTTTATGAAAAGGATTTTTCAAAGGTCATATCTCACGGCCAGCTGAGCGGCCGCCTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTGTGATTTAT
GGGTTTGTTGCTGCGATGATCTTATTTGTGTATTTGTCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATATGA
ATGAAACAGATTAGAAAAACTTGGCCGTTAAAGGATCAAGCCTTGTTATTGAAGCGGCTTGGTGAAATGATGGCGGGCGG
ATATACGCTTATGGATGGATTACGCCTGATGAAACTTCAGTTGAATAAGAGGCAGGCGGCCGCCTTGGCTGACGTGGTCA
CTCGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCTATAGGCATTTGTTAT
TTTGCTGTAACACATGGTGAATTGCCTTCTGCCATGATCCAGAGCGGAGAGCTTCTGGAACGAAAACTGGCACAGGCAGA
CGAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTTACAGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGACATTTATCAATCGATGAATATGAAAACCTCACGTTTTACTGATATGCTTTTCGCTTTTTTT
CAGCATATTGATCTGTTGGTCATTCTGACGGCTTTTTTTGCAGCAGGTATCGGGCTTTATTATTGGGTTGTGTTTAAGAA
AAAACCGCCTGCTCGGCAAATGCTTATTTGTGTCAGGATCCCTTTCGTTGGAAACCTAATCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTACAATCAGGCCTCTCCATTTATGACAGCCTAAATGCATTTAAACAACAAACG
TTTCTCCCTTTTTACCGCTGCGAGGCTGAGCAAGTGATTGAACGGTTAAAAGCTGGTGAATCAATTGAAGCCGCTATTTG
TGACAGCCCTTTTTATGAAAAGGATTTTTCAAAGGTCATATCTCACGGCCAGCTGAGCGGCCGCCTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTGTGATTTAT
GGGTTTGTTGCTGCGATGATCTTATTTGTGTATTTGTCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
86.687 |
93.623 |
0.812 |