Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | C0971_RS12260 | Genome accession | NZ_CP026143 |
| Coordinates | 2415882..2416193 (-) | Length | 103 a.a. |
| NCBI ID | WP_004435635.1 | Uniprot ID | I3EAF6 |
| Organism | Bacillus methanolicus strain DFS2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2410882..2421193
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0971_RS12220 (C0971_12280) | - | 2411086..2412783 (+) | 1698 | WP_248891844.1 | SNF2-related protein | - |
| C0971_RS12225 (C0971_12285) | - | 2412752..2413543 (+) | 792 | WP_004435620.1 | YqhG family protein | - |
| C0971_RS12230 (C0971_12290) | - | 2413589..2413765 (-) | 177 | WP_081485685.1 | YqzE family protein | - |
| C0971_RS12235 (C0971_12295) | - | 2413808..2414311 (-) | 504 | WP_248891845.1 | shikimate kinase | - |
| C0971_RS12240 (C0971_12300) | comGG | 2414325..2414711 (-) | 387 | WP_004435627.1 | competence type IV pilus minor pilin ComGG | - |
| C0971_RS12245 (C0971_12305) | comGF | 2414708..2415181 (-) | 474 | WP_248891847.1 | competence type IV pilus minor pilin ComGF | - |
| C0971_RS12250 (C0971_12310) | - | 2415132..2415461 (-) | 330 | WP_248891848.1 | hypothetical protein | - |
| C0971_RS12255 (C0971_12315) | comGD | 2415436..2415885 (-) | 450 | WP_004435633.1 | competence type IV pilus minor pilin ComGD | - |
| C0971_RS12260 (C0971_12320) | comGC | 2415882..2416193 (-) | 312 | WP_004435635.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C0971_RS12265 (C0971_12325) | comGB | 2416209..2417240 (-) | 1032 | WP_248891850.1 | competence type IV pilus assembly protein ComGB | - |
| C0971_RS12270 (C0971_12330) | comGA | 2417215..2418297 (-) | 1083 | WP_248891851.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C0971_RS12275 (C0971_12340) | - | 2418657..2419358 (+) | 702 | WP_248891853.1 | helix-turn-helix domain-containing protein | - |
| C0971_RS12280 (C0971_12345) | - | 2419442..2419687 (+) | 246 | WP_004435645.1 | DUF2626 domain-containing protein | - |
| C0971_RS12285 (C0971_12350) | - | 2419725..2420834 (-) | 1110 | WP_248891854.1 | SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11471.45 Da Isoelectric Point: 7.1325
>NTDB_id=267523 C0971_RS12260 WP_004435635.1 2415882..2416193(-) (comGC) [Bacillus methanolicus strain DFS2]
MKNEKGFTLIEMLIVLLVISILLIITIPNITKHNDNINNKGCEAFIKMVQAQVQAYEIEHKVYPQSVKDLISKGYLNEKE
DKCPNGKEVIITNGVAAVKEGSS
MKNEKGFTLIEMLIVLLVISILLIITIPNITKHNDNINNKGCEAFIKMVQAQVQAYEIEHKVYPQSVKDLISKGYLNEKE
DKCPNGKEVIITNGVAAVKEGSS
Nucleotide
Download Length: 312 bp
>NTDB_id=267523 C0971_RS12260 WP_004435635.1 2415882..2416193(-) (comGC) [Bacillus methanolicus strain DFS2]
TTGAAAAATGAAAAAGGTTTTACGTTAATAGAAATGTTGATTGTTTTGCTCGTCATTTCAATTTTGTTAATAATTACGAT
TCCAAATATTACAAAGCACAATGACAATATTAACAATAAAGGCTGTGAAGCATTCATAAAAATGGTTCAGGCTCAAGTCC
AGGCATACGAAATTGAACATAAGGTTTATCCTCAATCTGTAAAAGACCTGATTTCAAAAGGTTATCTTAATGAAAAAGAA
GATAAGTGTCCAAATGGGAAAGAAGTTATAATTACGAACGGTGTCGCAGCTGTGAAAGAAGGCTCTTCATGA
TTGAAAAATGAAAAAGGTTTTACGTTAATAGAAATGTTGATTGTTTTGCTCGTCATTTCAATTTTGTTAATAATTACGAT
TCCAAATATTACAAAGCACAATGACAATATTAACAATAAAGGCTGTGAAGCATTCATAAAAATGGTTCAGGCTCAAGTCC
AGGCATACGAAATTGAACATAAGGTTTATCCTCAATCTGTAAAAGACCTGATTTCAAAAGGTTATCTTAATGAAAAAGAA
GATAAGTGTCCAAATGGGAAAGAAGTTATAATTACGAACGGTGTCGCAGCTGTGAAAGAAGGCTCTTCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
57.732 |
94.175 |
0.544 |
| comGC | Staphylococcus aureus MW2 |
46.875 |
93.204 |
0.437 |
| comGC | Staphylococcus aureus N315 |
46.875 |
93.204 |
0.437 |