Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | C2U32_RS12555 | Genome accession | NZ_CP026125 |
| Coordinates | 2526532..2526957 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain ABNIH28 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2521532..2531957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U32_RS12525 (C2U32_12520) | - | 2522064..2523095 (+) | 1032 | WP_002057662.1 | lipase secretion chaperone | - |
| C2U32_RS12530 (C2U32_12525) | - | 2523210..2524151 (+) | 942 | WP_085943440.1 | lipase family alpha/beta hydrolase | - |
| C2U32_RS12535 (C2U32_12530) | rplS | 2524204..2524572 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| C2U32_RS12540 (C2U32_12535) | trmD | 2524780..2525520 (-) | 741 | WP_002057664.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| C2U32_RS12545 (C2U32_12540) | rimM | 2525566..2526114 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| C2U32_RS12550 (C2U32_12545) | rpsP | 2526134..2526385 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| C2U32_RS12555 (C2U32_12550) | pilE | 2526532..2526957 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| C2U32_RS12560 (C2U32_12555) | pilY2 | 2526954..2527436 (-) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| C2U32_RS12565 (C2U32_12560) | pilY1 | 2527449..2531303 (-) | 3855 | WP_000768951.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=267370 C2U32_RS12555 WP_000788342.1 2526532..2526957(-) (pilE) [Acinetobacter baumannii strain ABNIH28]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=267370 C2U32_RS12555 WP_000788342.1 2526532..2526957(-) (pilE) [Acinetobacter baumannii strain ABNIH28]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |