Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C2U32_RS10935 Genome accession   NZ_CP026125
Coordinates   2209988..2210371 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain ABNIH28     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2204988..2215371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2U32_RS10905 (C2U32_10900) - 2205230..2205373 (+) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  C2U32_RS10910 (C2U32_10905) dapE 2205499..2206632 (+) 1134 WP_001016580.1 succinyl-diaminopimelate desuccinylase -
  C2U32_RS10915 (C2U32_10910) - 2206770..2206967 (-) 198 Protein_2139 alpha/beta hydrolase -
  C2U32_RS10920 (C2U32_10915) - 2206934..2208958 (-) 2025 WP_017725536.1 methyl-accepting chemotaxis protein -
  C2U32_RS10925 (C2U32_10920) - 2209005..2209541 (-) 537 WP_000729762.1 chemotaxis protein CheW -
  C2U32_RS10930 (C2U32_10925) - 2209602..2209964 (-) 363 WP_000101096.1 PleD family two-component system response regulator -
  C2U32_RS10935 (C2U32_10930) pilG 2209988..2210371 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  C2U32_RS10940 (C2U32_10935) - 2210655..2211293 (+) 639 WP_005134798.1 hypothetical protein -
  C2U32_RS10945 (C2U32_10940) - 2211353..2212471 (+) 1119 WP_005134795.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=267366 C2U32_RS10935 WP_000389061.1 2209988..2210371(-) (pilG) [Acinetobacter baumannii strain ABNIH28]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=267366 C2U32_RS10935 WP_000389061.1 2209988..2210371(-) (pilG) [Acinetobacter baumannii strain ABNIH28]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTTTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment