Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | C2U64_RS03165 | Genome accession | NZ_CP026089 |
| Coordinates | 428337..428819 (+) | Length | 160 a.a. |
| NCBI ID | WP_002116770.1 | Uniprot ID | A0A009RUX0 |
| Organism | Acinetobacter pittii strain WCHAP005069 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 423337..433819
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U64_RS03155 (C2U64_03160) | pilX | 423651..424460 (+) | 810 | WP_002117088.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| C2U64_RS03160 (C2U64_03165) | pilY1 | 424472..428326 (+) | 3855 | WP_002116849.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| C2U64_RS03165 (C2U64_03170) | pilY2 | 428337..428819 (+) | 483 | WP_002116770.1 | type IV pilin protein | Machinery gene |
| C2U64_RS03170 (C2U64_03175) | pilE | 428816..429241 (+) | 426 | WP_002117055.1 | type IV pilin protein | Machinery gene |
| C2U64_RS03175 (C2U64_03180) | rpsP | 429389..429640 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| C2U64_RS03180 (C2U64_03185) | rimM | 429660..430208 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| C2U64_RS03185 (C2U64_03190) | trmD | 430251..431006 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| C2U64_RS03190 (C2U64_03195) | rplS | 431226..431594 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| C2U64_RS03195 (C2U64_03200) | lip | 431645..432586 (-) | 942 | WP_002116859.1 | lipase family alpha/beta hydrolase | - |
| C2U64_RS03200 (C2U64_03205) | - | 432702..433733 (-) | 1032 | WP_002116720.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17520.76 Da Isoelectric Point: 8.4721
>NTDB_id=267009 C2U64_RS03165 WP_002116770.1 428337..428819(+) (pilY2) [Acinetobacter pittii strain WCHAP005069]
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=267009 C2U64_RS03165 WP_002116770.1 428337..428819(+) (pilY2) [Acinetobacter pittii strain WCHAP005069]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.75 |
100 |
0.938 |
| comE | Acinetobacter baylyi ADP1 |
40.678 |
100 |
0.45 |