Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | C2H95_RS15530 | Genome accession | NZ_CP026037 |
| Coordinates | 3033753..3034088 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain PK5_17 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3028753..3039088
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H95_RS15510 (C2H95_15440) | gcvT | 3029344..3030432 (-) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| C2H95_RS15515 (C2H95_15445) | yqhH | 3030874..3032547 (+) | 1674 | WP_038829735.1 | SNF2-related protein | - |
| C2H95_RS15520 (C2H95_15450) | yqhG | 3032568..3033362 (+) | 795 | WP_032726154.1 | YqhG family protein | - |
| C2H95_RS15525 (C2H95_15460) | sinI | 3033546..3033719 (+) | 174 | WP_014477323.1 | anti-repressor SinI | Regulator |
| C2H95_RS15530 (C2H95_15465) | sinR | 3033753..3034088 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| C2H95_RS15535 (C2H95_15470) | tasA | 3034180..3034965 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| C2H95_RS15540 (C2H95_15475) | sipW | 3035030..3035602 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| C2H95_RS15545 (C2H95_15480) | tapA | 3035586..3036347 (-) | 762 | WP_032726156.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C2H95_RS15550 (C2H95_15485) | yqzG | 3036618..3036944 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2H95_RS15555 (C2H95_15490) | spoIIT | 3036986..3037165 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| C2H95_RS15560 (C2H95_15495) | comGG | 3037237..3037611 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| C2H95_RS15565 (C2H95_15500) | comGF | 3037612..3037995 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| C2H95_RS15570 (C2H95_15505) | comGE | 3038021..3038368 (-) | 348 | WP_063335293.1 | ComG operon protein 5 | Machinery gene |
| C2H95_RS15575 (C2H95_15510) | comGD | 3038352..3038783 (-) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C2H95_RS15580 (C2H95_15515) | comGC | 3038773..3039069 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=265714 C2H95_RS15530 WP_003226345.1 3033753..3034088(+) (sinR) [Bacillus subtilis strain PK5_17]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=265714 C2H95_RS15530 WP_003226345.1 3033753..3034088(+) (sinR) [Bacillus subtilis strain PK5_17]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |