Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | C2H96_RS20180 | Genome accession | NZ_CP026035 |
| Coordinates | 3920128..3920463 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain PK5_68 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3915128..3925463
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H96_RS20130 (C2H96_20075) | comGC | 3915147..3915443 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C2H96_RS20135 (C2H96_20080) | comGD | 3915433..3915864 (+) | 432 | WP_120028362.1 | comG operon protein ComGD | Machinery gene |
| C2H96_RS20140 (C2H96_20085) | comGE | 3915848..3916195 (+) | 348 | WP_070547530.1 | ComG operon protein 5 | Machinery gene |
| C2H96_RS20145 (C2H96_20090) | comGF | 3916221..3916604 (+) | 384 | WP_070547529.1 | ComG operon protein ComGF | Machinery gene |
| C2H96_RS20150 (C2H96_20095) | comGG | 3916605..3916979 (+) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| C2H96_RS20155 (C2H96_20100) | spoIIT | 3917051..3917230 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| C2H96_RS20160 (C2H96_20105) | yqzG | 3917272..3917598 (-) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2H96_RS20165 (C2H96_20110) | tapA | 3917869..3918630 (+) | 762 | WP_120028361.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C2H96_RS20170 (C2H96_20115) | sipW | 3918614..3919186 (+) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| C2H96_RS20175 (C2H96_20120) | tasA | 3919251..3920036 (+) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| C2H96_RS20180 (C2H96_20125) | sinR | 3920128..3920463 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| C2H96_RS20185 (C2H96_20130) | sinI | 3920497..3920670 (-) | 174 | WP_014477323.1 | anti-repressor SinI | Regulator |
| C2H96_RS20190 (C2H96_20140) | yqhG | 3920854..3921648 (-) | 795 | WP_032726154.1 | YqhG family protein | - |
| C2H96_RS20195 (C2H96_20145) | yqhH | 3921669..3923342 (-) | 1674 | WP_120028360.1 | SNF2-related protein | - |
| C2H96_RS20200 (C2H96_20150) | gcvT | 3923784..3924872 (+) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=265577 C2H96_RS20180 WP_003226345.1 3920128..3920463(-) (sinR) [Bacillus subtilis strain PK5_68]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=265577 C2H96_RS20180 WP_003226345.1 3920128..3920463(-) (sinR) [Bacillus subtilis strain PK5_68]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |