Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | C2H96_RS20120 | Genome accession | NZ_CP026035 |
| Coordinates | 3913039..3914109 (+) | Length | 356 a.a. |
| NCBI ID | WP_070547533.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain PK5_68 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3908039..3919109
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H96_RS20090 (C2H96_20030) | yqgY | 3908234..3908479 (-) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
| C2H96_RS20095 (C2H96_20035) | mgsR | 3908711..3909091 (+) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| C2H96_RS20105 (C2H96_20045) | rsbRD | 3909315..3910151 (+) | 837 | WP_070547534.1 | RsbT co-antagonist protein RsbRD | - |
| C2H96_RS20110 (C2H96_20050) | yqhB | 3910204..3911532 (-) | 1329 | WP_032726166.1 | hemolysin family protein | - |
| C2H96_RS20115 (C2H96_20055) | corA | 3911675..3912628 (+) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| C2H96_RS21525 (C2H96_20060) | - | 3912694..3912828 (+) | 135 | WP_257786427.1 | hypothetical protein | - |
| C2H96_RS20120 (C2H96_20065) | comGA | 3913039..3914109 (+) | 1071 | WP_070547533.1 | competence protein ComGA | Machinery gene |
| C2H96_RS20125 (C2H96_20070) | comGB | 3914096..3915133 (+) | 1038 | WP_070547532.1 | comG operon protein ComGB | Machinery gene |
| C2H96_RS20130 (C2H96_20075) | comGC | 3915147..3915443 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C2H96_RS20135 (C2H96_20080) | comGD | 3915433..3915864 (+) | 432 | WP_120028362.1 | comG operon protein ComGD | Machinery gene |
| C2H96_RS20140 (C2H96_20085) | comGE | 3915848..3916195 (+) | 348 | WP_070547530.1 | ComG operon protein 5 | Machinery gene |
| C2H96_RS20145 (C2H96_20090) | comGF | 3916221..3916604 (+) | 384 | WP_070547529.1 | ComG operon protein ComGF | Machinery gene |
| C2H96_RS20150 (C2H96_20095) | comGG | 3916605..3916979 (+) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| C2H96_RS20155 (C2H96_20100) | spoIIT | 3917051..3917230 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| C2H96_RS20160 (C2H96_20105) | yqzG | 3917272..3917598 (-) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2H96_RS20165 (C2H96_20110) | tapA | 3917869..3918630 (+) | 762 | WP_120028361.1 | amyloid fiber anchoring/assembly protein TapA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40444.57 Da Isoelectric Point: 8.8402
>NTDB_id=265570 C2H96_RS20120 WP_070547533.1 3913039..3914109(+) (comGA) [Bacillus subtilis strain PK5_68]
MDSIENVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIENVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=265570 C2H96_RS20120 WP_070547533.1 3913039..3914109(+) (comGA) [Bacillus subtilis strain PK5_68]
TTGGATTCAATAGAAAATGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCTACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCTGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAATGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCTACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCTGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |