Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   C2H96_RS14370 Genome accession   NZ_CP026035
Coordinates   2819335..2820492 (+) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain PK5_68     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 2814335..2825492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS14350 (C2H96_14280) tuaH 2814803..2815996 (+) 1194 WP_080481292.1 glycosyltransferase family 1 protein -
  C2H96_RS14355 (C2H96_14285) tagO 2816141..2817217 (+) 1077 WP_003227975.1 MraY family glycosyltransferase -
  C2H96_RS14360 (C2H96_14290) tagV 2817290..2818465 (-) 1176 WP_120027551.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  C2H96_RS14365 (C2H96_14295) yvyE 2818465..2819118 (-) 654 WP_003227979.1 YigZ family protein -
  C2H96_RS14370 (C2H96_14300) degS 2819335..2820492 (+) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  C2H96_RS14375 (C2H96_14305) degU 2820575..2821264 (+) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  C2H96_RS14380 (C2H96_14310) fakBA 2821362..2822207 (+) 846 WP_038829896.1 DegV family protein -
  C2H96_RS14385 (C2H96_14315) comFA 2822313..2823704 (+) 1392 WP_120027550.1 ATP-dependent helicase ComFA Machinery gene
  C2H96_RS14390 (C2H96_14320) comFB 2823764..2824060 (+) 297 WP_120027549.1 late competence protein ComFB -
  C2H96_RS14395 (C2H96_14325) comFC 2824024..2824746 (+) 723 WP_120027548.1 comF operon protein ComFC Machinery gene
  C2H96_RS14400 (C2H96_14330) yvyF 2824820..2825239 (+) 420 WP_003227995.1 TIGR03826 family flagellar region protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=265548 C2H96_RS14370 WP_003227983.1 2819335..2820492(+) (degS) [Bacillus subtilis strain PK5_68]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=265548 C2H96_RS14370 WP_003227983.1 2819335..2820492(+) (degS) [Bacillus subtilis strain PK5_68]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCTGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment