Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   C2H91_RS12050 Genome accession   NZ_CP026030
Coordinates   2431772..2431891 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain PK3_9     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 2426772..2436891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS12030 (C2H91_12055) pbpG 2427131..2429206 (-) 2076 WP_249850790.1 transglycosylase domain-containing protein -
  C2H91_RS12035 (C2H91_12060) speE 2429408..2430238 (+) 831 WP_003227543.1 spermidine synthase -
  C2H91_RS12040 (C2H91_12065) speB 2430299..2431171 (+) 873 WP_249850791.1 agmatinase -
  C2H91_RS12045 (C2H91_12070) ywhH 2431202..2431674 (-) 473 Protein_2328 YbaK/EbsC family protein -
  C2H91_RS12050 (C2H91_12075) phrF 2431772..2431891 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  C2H91_RS12055 (C2H91_12080) rapF 2431875..2433020 (-) 1146 WP_249850792.1 response regulator aspartate phosphatase RapF Regulator
  C2H91_RS20860 (C2H91_12085) - 2433023..2433253 (+) 231 Protein_2331 hypothetical protein -
  C2H91_RS12060 (C2H91_12090) ywhK 2433250..2434605 (+) 1356 WP_049140945.1 YncE family protein -
  C2H91_RS12065 (C2H91_12095) ywhL 2434644..2436020 (+) 1377 WP_014481223.1 YncE family protein -
  C2H91_RS12070 (C2H91_12100) albG 2436026..2436727 (-) 702 WP_046160959.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=265277 C2H91_RS12050 WP_009968329.1 2431772..2431891(-) (phrF) [Bacillus subtilis strain PK3_9]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=265277 C2H91_RS12050 WP_009968329.1 2431772..2431891(-) (phrF) [Bacillus subtilis strain PK3_9]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment