Detailed information NTG0265278

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C2H91_RS12055
• Genome accession: NZ_CP026030
• Coordinates: 2431875..2433020 (-)
• Length: 381 a.a.
• NCBI ID: WP_249850792.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK3_9
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2426875..2438020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H91_RS12030 (C2H91_12055)	pbpG	2427131..2429206 (-)	2076	WP_249850790.1	transglycosylase domain-containing protein	-
C2H91_RS12035 (C2H91_12060)	speE	2429408..2430238 (+)	831	WP_003227543.1	spermidine synthase	-
C2H91_RS12040 (C2H91_12065)	speB	2430299..2431171 (+)	873	WP_249850791.1	agmatinase	-
C2H91_RS12045 (C2H91_12070)	ywhH	2431202..2431674 (-)	473	Protein_2328	YbaK/EbsC family protein	-
C2H91_RS12050 (C2H91_12075)	phrF	2431772..2431891 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
C2H91_RS12055 (C2H91_12080)	rapF	2431875..2433020 (-)	1146	WP_249850792.1	response regulator aspartate phosphatase RapF	Regulator
C2H91_RS20860 (C2H91_12085)	-	2433023..2433253 (+)	231	Protein_2331	hypothetical protein	-
C2H91_RS12060 (C2H91_12090)	ywhK	2433250..2434605 (+)	1356	WP_049140945.1	YncE family protein	-
C2H91_RS12065 (C2H91_12095)	ywhL	2434644..2436020 (+)	1377	WP_014481223.1	YncE family protein	-
C2H91_RS12070 (C2H91_12100)	albG	2436026..2436727 (-)	702	WP_046160959.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
C2H91_RS12075 (C2H91_12105)	albF	2436724..2438004 (-)	1281	WP_041850411.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=265278 C2H91_RS12055 WP_249850792.1 2431875..2433020(-) (rapF) [Bacillus subtilis strain PK3_9]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKLSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=265278 C2H91_RS12055 WP_249850792.1 2431875..2433020(-) (rapF) [Bacillus subtilis strain PK3_9]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGTTGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572