Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BS11774_RS13675 Genome accession   NZ_CP026010
Coordinates   2585637..2586101 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain ATCC 11774     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2580637..2591101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS13655 (BS11774_13585) - 2581797..2582924 (+) 1128 WP_250634893.1 ATP-binding protein -
  BS11774_RS13660 (BS11774_13590) dapX 2582934..2584115 (-) 1182 WP_128473865.1 aminotransferase A -
  BS11774_RS13665 (BS11774_13595) - 2584317..2584478 (-) 162 WP_128473866.1 hypothetical protein -
  BS11774_RS13670 (BS11774_13600) cheV 2584682..2585593 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  BS11774_RS13675 (BS11774_13605) kre 2585637..2586101 (-) 465 WP_003232406.1 YkyB family protein Regulator
  BS11774_RS13680 (BS11774_13610) ykuC 2586227..2587519 (-) 1293 WP_014479656.1 MFS transporter -
  BS11774_RS13685 (BS11774_13615) ltdD 2587595..2588089 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  BS11774_RS13690 (BS11774_13620) ppeE 2588146..2589006 (-) 861 WP_017697271.1 metallophosphoesterase -
  BS11774_RS13695 (BS11774_13625) fadH 2589149..2589913 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=264992 BS11774_RS13675 WP_003232406.1 2585637..2586101(-) (kre) [Bacillus subtilis strain ATCC 11774]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=264992 BS11774_RS13675 WP_003232406.1 2585637..2586101(-) (kre) [Bacillus subtilis strain ATCC 11774]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAGCCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment