Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CYK57_RS05150 | Genome accession | NZ_CP026009 |
| Coordinates | 1125289..1125735 (-) | Length | 148 a.a. |
| NCBI ID | WP_009874618.1 | Uniprot ID | A3N0P0 |
| Organism | Actinobacillus pleuropneumoniae strain App6 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1120289..1130735
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYK57_RS05125 (CYK57_01034) | yacG | 1121196..1121384 (-) | 189 | WP_005597388.1 | DNA gyrase inhibitor YacG | - |
| CYK57_RS05130 (CYK57_01035) | coaE | 1121366..1122004 (-) | 639 | WP_009874616.1 | dephospho-CoA kinase | - |
| CYK57_RS05135 (CYK57_01036) | - | 1122026..1122664 (-) | 639 | WP_009874617.1 | prepilin peptidase | - |
| CYK57_RS05140 (CYK57_01037) | pilC | 1122691..1123893 (-) | 1203 | WP_005601207.1 | type II secretion system F family protein | Machinery gene |
| CYK57_RS05145 (CYK57_01038) | pilB | 1123877..1125271 (-) | 1395 | WP_005615186.1 | GspE/PulE family protein | Machinery gene |
| CYK57_RS05150 (CYK57_01039) | pilA | 1125289..1125735 (-) | 447 | WP_009874618.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| CYK57_RS05155 (CYK57_01040) | radA | 1125917..1127296 (+) | 1380 | WP_005601211.1 | DNA repair protein RadA | Machinery gene |
| CYK57_RS05160 (CYK57_01041) | - | 1127340..1127573 (-) | 234 | WP_005597399.1 | YgjV family protein | - |
| CYK57_RS05165 (CYK57_01042) | folA | 1127700..1128188 (-) | 489 | WP_005597400.1 | type 3 dihydrofolate reductase | - |
| CYK57_RS05170 (CYK57_01043) | proB | 1128275..1129366 (+) | 1092 | WP_005601213.1 | glutamate 5-kinase | - |
| CYK57_RS05175 (CYK57_01044) | - | 1129379..1130155 (+) | 777 | WP_005597402.1 | TSUP family transporter | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 16006.46 Da Isoelectric Point: 7.6257
>NTDB_id=264928 CYK57_RS05150 WP_009874618.1 1125289..1125735(-) (pilA) [Actinobacillus pleuropneumoniae strain App6]
MQKLSLIRPLTNAFTLIELMIVIAIIAILATVAIPSYNSYTQKAALSELLAASASYKTDVEICIYNTGDSKNCSGGQNGV
RKMTELRQAKYLNAITVEGGTITVTGKGNLQEYGYTMTPIHNGSTISWETKCKGEDLSLFPANFCAIN
MQKLSLIRPLTNAFTLIELMIVIAIIAILATVAIPSYNSYTQKAALSELLAASASYKTDVEICIYNTGDSKNCSGGQNGV
RKMTELRQAKYLNAITVEGGTITVTGKGNLQEYGYTMTPIHNGSTISWETKCKGEDLSLFPANFCAIN
Nucleotide
Download Length: 447 bp
>NTDB_id=264928 CYK57_RS05150 WP_009874618.1 1125289..1125735(-) (pilA) [Actinobacillus pleuropneumoniae strain App6]
ATGCAAAAACTAAGTCTTATTCGACCGCTTACTAACGCGTTTACTTTAATTGAATTGATGATCGTGATTGCGATTATTGC
CATTTTAGCTACGGTTGCAATTCCGTCATATAACAGTTATACCCAAAAAGCGGCGCTTTCGGAGCTATTGGCGGCATCGG
CTTCTTATAAAACGGATGTCGAGATCTGCATATATAACACCGGAGATTCTAAAAACTGTAGCGGCGGTCAAAACGGTGTC
AGAAAAATGACGGAGCTTAGACAGGCTAAATATTTAAATGCCATTACGGTGGAAGGCGGAACGATTACGGTAACGGGGAA
GGGGAATCTGCAGGAATACGGTTATACGATGACACCGATTCATAACGGTAGCACTATTTCTTGGGAAACGAAATGTAAAG
GGGAGGACTTAAGTTTATTTCCGGCAAATTTCTGTGCGATAAATTAG
ATGCAAAAACTAAGTCTTATTCGACCGCTTACTAACGCGTTTACTTTAATTGAATTGATGATCGTGATTGCGATTATTGC
CATTTTAGCTACGGTTGCAATTCCGTCATATAACAGTTATACCCAAAAAGCGGCGCTTTCGGAGCTATTGGCGGCATCGG
CTTCTTATAAAACGGATGTCGAGATCTGCATATATAACACCGGAGATTCTAAAAACTGTAGCGGCGGTCAAAACGGTGTC
AGAAAAATGACGGAGCTTAGACAGGCTAAATATTTAAATGCCATTACGGTGGAAGGCGGAACGATTACGGTAACGGGGAA
GGGGAATCTGCAGGAATACGGTTATACGATGACACCGATTCATAACGGTAGCACTATTTCTTGGGAAACGAAATGTAAAG
GGGAGGACTTAAGTTTATTTCCGGCAAATTTCTGTGCGATAAATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Glaesserella parasuis strain SC1401 |
68.919 |
100 |
0.689 |
| pilA | Haemophilus influenzae 86-028NP |
55.172 |
97.973 |
0.541 |
| pilA | Haemophilus influenzae Rd KW20 |
53.103 |
97.973 |
0.52 |