Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   C0W57_RS20180 Genome accession   NZ_CP025939
Coordinates   3949948..3950901 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain 10075     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3944948..3955901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0W57_RS20155 (C0W57_20155) - 3944995..3946428 (+) 1434 WP_103042081.1 sensor histidine kinase -
  C0W57_RS20160 (C0W57_20160) rapC 3946581..3947729 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  C0W57_RS20165 (C0W57_20165) phrC 3947713..3947832 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  C0W57_RS20170 (C0W57_20170) - 3947980..3948090 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  C0W57_RS20175 (C0W57_20175) - 3948170..3949534 (-) 1365 WP_015239155.1 aspartate kinase -
  C0W57_RS20180 (C0W57_20180) ceuB 3949948..3950901 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  C0W57_RS20185 (C0W57_20185) - 3950891..3951838 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  C0W57_RS20190 (C0W57_20190) - 3951832..3952590 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -
  C0W57_RS20195 (C0W57_20195) - 3952612..3953556 (+) 945 WP_021495116.1 siderophore ABC transporter substrate-binding protein -
  C0W57_RS20200 (C0W57_20200) - 3953598..3955022 (-) 1425 WP_017419270.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=264665 C0W57_RS20180 WP_015239156.1 3949948..3950901(+) (ceuB) [Bacillus velezensis strain 10075]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=264665 C0W57_RS20180 WP_015239156.1 3949948..3950901(+) (ceuB) [Bacillus velezensis strain 10075]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTTGTCAAAGGCAGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCTCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment