Detailed information NTG0264663

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C0W57_RS20160
• Genome accession: NZ_CP025939
• Coordinates: 3946581..3947729 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 10075
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3941581..3952729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C0W57_RS20140 (C0W57_20140)	-	3941981..3942664 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
C0W57_RS20145 (C0W57_20145)	-	3942679..3944112 (-)	1434	WP_029974314.1	ABC transporter permease	-
C0W57_RS20150 (C0W57_20150)	-	3944325..3945008 (+)	684	WP_014416901.1	response regulator transcription factor	-
C0W57_RS20155 (C0W57_20155)	-	3944995..3946428 (+)	1434	WP_103042081.1	sensor histidine kinase	-
C0W57_RS20160 (C0W57_20160)	rapC	3946581..3947729 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
C0W57_RS20165 (C0W57_20165)	phrC	3947713..3947832 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
C0W57_RS20170 (C0W57_20170)	-	3947980..3948090 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
C0W57_RS20175 (C0W57_20175)	-	3948170..3949534 (-)	1365	WP_015239155.1	aspartate kinase	-
C0W57_RS20180 (C0W57_20180)	ceuB	3949948..3950901 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
C0W57_RS20185 (C0W57_20185)	-	3950891..3951838 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
C0W57_RS20190 (C0W57_20190)	-	3951832..3952590 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=264663 C0W57_RS20160 WP_007410270.1 3946581..3947729(+) (rapC) [Bacillus velezensis strain 10075]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=264663 C0W57_RS20160 WP_007410270.1 3946581..3947729(+) (rapC) [Bacillus velezensis strain 10075]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568