Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LVIS_RS18075 Genome accession   NC_008497
Coordinates   1319240..1320517 (-) Length   425 a.a.
NCBI ID   WP_011668018.1    Uniprot ID   -
Organism   Levilactobacillus brevis ATCC 367     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1314240..1325517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVIS_RS18070 (LVIS_1342) - 1317495..1319204 (-) 1710 WP_011668017.1 proline--tRNA ligase -
  LVIS_RS18075 (LVIS_1343) eeP 1319240..1320517 (-) 1278 WP_011668018.1 RIP metalloprotease RseP Regulator
  LVIS_RS18080 (LVIS_1344) - 1320613..1321404 (-) 792 WP_011668019.1 phosphatidate cytidylyltransferase -
  LVIS_RS18085 (LVIS_1345) - 1321426..1322214 (-) 789 WP_011668020.1 isoprenyl transferase -
  LVIS_RS18090 (LVIS_1346) - 1322317..1322739 (-) 423 WP_011668021.1 hypothetical protein -
  LVIS_RS18095 (LVIS_1347) frr 1322766..1323322 (-) 557 Protein_1275 ribosome recycling factor -
  LVIS_RS18100 (LVIS_1348) pyrH 1323325..1324047 (-) 723 WP_011668022.1 UMP kinase -
  LVIS_RS18105 (LVIS_1349) tsf 1324194..1325078 (-) 885 WP_011668023.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45937.17 Da        Isoelectric Point: 7.2020

>NTDB_id=26464 LVIS_RS18075 WP_011668018.1 1319240..1320517(-) (eeP) [Levilactobacillus brevis ATCC 367]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRVAGAEDDEEELK
PGTPVSLYVGADEKVERINTSKKSTLFNGIPLEVTATDLEDELWIEGYENGDESAIKRYAVAHDATVIESDGTELQIAPK
DVQFQSASLGRRLMTNFAGPMNNILLAIVTFMLMSFAQGGVSMGTNQVQVADSPVSVAKQAGVKTNDKITAVNGRKTTSW
TDLSTAIQPLANKKTTLTIQRGSATKHITVTPKGETSNGKTVGMIGITQAQDKSIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAVT
LIGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=26464 LVIS_RS18075 WP_011668018.1 1319240..1320517(-) (eeP) [Levilactobacillus brevis ATCC 367]
GTGATTACAACGATTATTACCTTTATCATTGTCTTTGGGATTTTGGTCATTGTCCATGAATTCGGGCATTTTTACTTTGC
CAAGCGAGGCGGCATTCTCGTCCGTGAATTCTCGATTGGAATGGGGCCAAAATTGGTTTACCACCGTGGCAAAGATGGCA
CGACTTACACACTGCGGTTATTACCAGTGGGCGGTTACGTCCGGGTGGCGGGTGCTGAAGATGACGAAGAAGAGCTGAAA
CCGGGAACGCCAGTTAGCCTGTACGTGGGCGCTGACGAAAAGGTTGAACGAATCAATACCAGCAAAAAATCCACGTTATT
TAACGGTATTCCGTTAGAAGTTACCGCAACGGATCTAGAGGATGAGTTGTGGATTGAAGGCTATGAAAATGGTGACGAAA
GTGCCATTAAGCGCTATGCGGTTGCTCACGATGCCACGGTGATTGAAAGCGACGGGACGGAGCTACAAATTGCCCCGAAG
GACGTTCAATTTCAGTCGGCATCATTAGGCCGACGATTGATGACGAACTTCGCTGGACCGATGAACAATATCTTATTAGC
GATTGTTACCTTTATGCTGATGTCCTTTGCTCAGGGTGGCGTTTCAATGGGCACGAATCAGGTTCAAGTAGCTGATTCAC
CGGTATCAGTGGCGAAACAGGCTGGCGTGAAGACCAACGATAAGATTACGGCAGTCAACGGTCGAAAGACCACCAGCTGG
ACCGATCTTAGTACCGCGATTCAGCCATTGGCCAACAAAAAAACAACGCTGACGATTCAAAGAGGATCGGCGACCAAACA
CATTACAGTGACACCTAAAGGTGAAACTTCCAACGGTAAAACGGTGGGGATGATTGGGATCACGCAAGCCCAAGATAAGA
GCATTGGGGCCATCTTAGCTTCTGGATTTACACAGACGTGGACGATGACCAAAGCGTTGTTTGGGGCTTTGTGGCACATG
GTTTCTGGTCACTTTAGTTTGAACGATTTAGGCGGACCAGTCGCCATTTTTGCCACAACCTCACAGGCCACCAAGTTTGG
CTTGGTTGGCGTGTTAAATTTCTTAGCCTTTTTATCAATTAATTTGGCAATTGTGAACTTACTGCCGATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCTATTCGGCGTAAGCCGCTTTCAGAAAATGTGGAAGCTGCCGTTACG
TTGATTGGCGTGGGGTTCTTAGTTCTGCTTATGTTACTGGTGACGTGGAATGATATTGAACGCTACTTTATTCATTAA

Domains


Predicted by InterproScan.

(214-261)

(7-410)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.471

100

0.485

  eeP Streptococcus thermophilus LMD-9

48.471

100

0.485


Multiple sequence alignment